Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm25214-201ENSMUST00000104573 129 ntBASIC10.68□□□□□ -0.7
Lsm6P62313 Gm15370-201ENSMUST00000117158 253 ntBASIC10.68□□□□□ -0.7
Lsm6P62313 Gm13392-201ENSMUST00000117708 150 ntBASIC10.68□□□□□ -0.7
Lsm6P62313 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.68□□□□□ -0.7
Lsm6P62313 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm6P62313 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm6P62313 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.68□□□□□ -0.7
Lsm6P62313 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm6P62313 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm6P62313 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Lsm6P62313 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.68□□□□□ -0.7
Lsm6P62313 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.68□□□□□ -0.7
Lsm6P62313 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.68□□□□□ -0.7
Lsm6P62313 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.68□□□□□ -0.7
Lsm6P62313 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm6P62313 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm6P62313 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Lsm6P62313 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm6P62313 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Lsm6P62313 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Lsm6P62313 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm6P62313 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm6P62313 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm6P62313 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm6P62313 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm6P62313 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm6P62313 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm6P62313 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm6P62313 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm6P62313 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm6P62313 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm6P62313 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm6P62313 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm6P62313 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm6P62313 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.68□□□□□ -0.7
Lsm6P62313 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm6P62313 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm6P62313 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm6P62313 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm6P62313 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Lsm6P62313 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm6P62313 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm6P62313 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm6P62313 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm6P62313 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Lsm6P62313 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm6P62313 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm6P62313 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm6P62313 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.67□□□□□ -0.7
Lsm6P62313 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm6P62313 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm6P62313 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm6P62313 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Lsm6P62313 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.67□□□□□ -0.7
Lsm6P62313 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.67□□□□□ -0.7
Lsm6P62313 Rprl1-201ENSMUST00000158050 327 ntBASIC10.67□□□□□ -0.7
Lsm6P62313 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.67□□□□□ -0.7
Lsm6P62313 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.67□□□□□ -0.7
Lsm6P62313 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Lsm6P62313 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm6P62313 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.67□□□□□ -0.7
Lsm6P62313 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm6P62313 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.67□□□□□ -0.7
Lsm6P62313 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Lsm6P62313 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.67□□□□□ -0.7
Lsm6P62313 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.67□□□□□ -0.7
Lsm6P62313 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.67□□□□□ -0.7
Lsm6P62313 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Lsm6P62313 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm6P62313 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm6P62313 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Lsm6P62313 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm6P62313 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Lsm6P62313 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm6P62313 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm6P62313 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm6P62313 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Lsm6P62313 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Lsm6P62313 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.67□□□□□ -0.7
Lsm6P62313 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm6P62313 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm6P62313 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.67□□□□□ -0.7
Lsm6P62313 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Lsm6P62313 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Lsm6P62313 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm6P62313 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.67□□□□□ -0.7
Lsm6P62313 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm6P62313 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm6P62313 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.66□□□□□ -0.7
Lsm6P62313 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm6P62313 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm6P62313 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm6P62313 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm6P62313 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.66□□□□□ -0.7
Lsm6P62313 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm6P62313 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm6P62313 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm6P62313 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm6P62313 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm6P62313 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms