Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 AC130671.2-201ENSMUST00000227224 1621 ntBASIC9.8□□□□□ -0.84
Lmo4P61969 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC9.8□□□□□ -0.84
Lmo4P61969 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 Gm43807-201ENSMUST00000200678 1781 ntBASIC9.8□□□□□ -0.84
Lmo4P61969 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC9.8□□□□□ -0.84
Lmo4P61969 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lmo4P61969 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC9.79□□□□□ -0.84
Lmo4P61969 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC9.79□□□□□ -0.84
Lmo4P61969 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Lmo4P61969 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC9.79□□□□□ -0.84
Lmo4P61969 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Lmo4P61969 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Lmo4P61969 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Lmo4P61969 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Gm14314-201ENSMUST00000118225 1015 ntBASIC9.79□□□□□ -0.84
Lmo4P61969 Gm15207-201ENSMUST00000119259 442 ntBASIC9.79□□□□□ -0.84
Lmo4P61969 Gm15573-201ENSMUST00000119487 540 ntBASIC9.79□□□□□ -0.84
Lmo4P61969 Gm12029-201ENSMUST00000120073 832 ntBASIC9.79□□□□□ -0.84
Lmo4P61969 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC9.79□□□□□ -0.84
Lmo4P61969 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC9.79□□□□□ -0.84
Lmo4P61969 Gm7666-201ENSMUST00000146631 819 ntBASIC9.79□□□□□ -0.84
Lmo4P61969 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC9.79□□□□□ -0.84
Lmo4P61969 Gm22144-201ENSMUST00000157402 102 ntBASIC9.79□□□□□ -0.84
Lmo4P61969 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC9.79□□□□□ -0.84
Lmo4P61969 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC9.79□□□□□ -0.84
Lmo4P61969 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC9.79□□□□□ -0.84
Lmo4P61969 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC9.79□□□□□ -0.84
Lmo4P61969 Gm19287-201ENSMUST00000203190 358 ntBASIC9.79□□□□□ -0.84
Lmo4P61969 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
Lmo4P61969 Gm17931-201ENSMUST00000208132 634 ntBASIC9.79□□□□□ -0.84
Lmo4P61969 Gm8285-201ENSMUST00000208293 759 ntBASIC9.79□□□□□ -0.84
Lmo4P61969 AC122876.1-201ENSMUST00000217619 825 ntBASIC9.79□□□□□ -0.84
Lmo4P61969 AC154290.1-201ENSMUST00000223786 1240 ntBASIC9.79□□□□□ -0.84
Lmo4P61969 CT009713.8-202ENSMUST00000224732 385 ntBASIC9.79□□□□□ -0.84
Lmo4P61969 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Gm5537-201ENSMUST00000091117 1252 ntBASIC9.79□□□□□ -0.84
Lmo4P61969 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Lmo4P61969 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC9.79□□□□□ -0.84
Lmo4P61969 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC9.79□□□□□ -0.84
Lmo4P61969 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Lmo4P61969 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lmo4P61969 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lmo4P61969 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lmo4P61969 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Lmo4P61969 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC9.78□□□□□ -0.84
Lmo4P61969 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Lmo4P61969 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Lmo4P61969 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lmo4P61969 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lmo4P61969 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
Lmo4P61969 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lmo4P61969 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lmo4P61969 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Lmo4P61969 Gm13916-201ENSMUST00000117368 628 ntBASIC9.78□□□□□ -0.84
Lmo4P61969 Gm11667-201ENSMUST00000119828 486 ntBASIC9.78□□□□□ -0.84
Lmo4P61969 Gm15566-201ENSMUST00000121130 590 ntBASIC9.78□□□□□ -0.84
Lmo4P61969 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC9.78□□□□□ -0.84
Lmo4P61969 Gm4726-201ENSMUST00000135604 736 ntBASIC9.78□□□□□ -0.84
Lmo4P61969 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC9.78□□□□□ -0.84
Lmo4P61969 Gm6019-201ENSMUST00000148369 736 ntBASIC9.78□□□□□ -0.84
Lmo4P61969 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lmo4P61969 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms