Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tpm2P58774 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.96□□□□□ -0.17
Tpm2P58774 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tpm2P58774 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Tpm2P58774 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Tpm2P58774 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tpm2P58774 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tpm2P58774 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Tpm2P58774 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tpm2P58774 Gm13612-201ENSMUST00000119276 390 ntBASIC13.96□□□□□ -0.17
Tpm2P58774 Gm14704-201ENSMUST00000120300 874 ntBASIC13.96□□□□□ -0.17
Tpm2P58774 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tpm2P58774 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.96□□□□□ -0.17
Tpm2P58774 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.96□□□□□ -0.17
Tpm2P58774 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.96□□□□□ -0.17
Tpm2P58774 Gm28911-201ENSMUST00000188837 117 ntBASIC13.96□□□□□ -0.17
Tpm2P58774 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tpm2P58774 Gm18018-201ENSMUST00000198273 408 ntBASIC13.96□□□□□ -0.17
Tpm2P58774 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.96□□□□□ -0.17
Tpm2P58774 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Tpm2P58774 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.96□□□□□ -0.17
Tpm2P58774 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tpm2P58774 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tpm2P58774 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tpm2P58774 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Tpm2P58774 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tpm2P58774 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm2P58774 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm2P58774 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm2P58774 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Tpm2P58774 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm2P58774 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm2P58774 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm2P58774 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm2P58774 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm2P58774 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.95□□□□□ -0.18
Tpm2P58774 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm2P58774 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Tpm2P58774 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm2P58774 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm2P58774 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.95□□□□□ -0.18
Tpm2P58774 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.95□□□□□ -0.18
Tpm2P58774 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.95□□□□□ -0.18
Tpm2P58774 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.95□□□□□ -0.18
Tpm2P58774 Gm37922-201ENSMUST00000195596 455 ntBASIC13.95□□□□□ -0.18
Tpm2P58774 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.95□□□□□ -0.18
Tpm2P58774 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm2P58774 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm2P58774 Gm8463-201ENSMUST00000208573 613 ntBASIC13.95□□□□□ -0.18
Tpm2P58774 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm2P58774 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Tpm2P58774 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.95□□□□□ -0.18
Tpm2P58774 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm2P58774 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm2P58774 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Tpm2P58774 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm2P58774 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm2P58774 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm2P58774 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm2P58774 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm2P58774 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm2P58774 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm2P58774 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm2P58774 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm2P58774 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm2P58774 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm2P58774 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm2P58774 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm2P58774 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm2P58774 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm2P58774 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm2P58774 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm2P58774 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm2P58774 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Tpm2P58774 Gm8805-201ENSMUST00000117848 313 ntBASIC13.94□□□□□ -0.18
Tpm2P58774 Gm8213-201ENSMUST00000118191 441 ntBASIC13.94□□□□□ -0.18
Tpm2P58774 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm2P58774 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm2P58774 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm2P58774 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm2P58774 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm2P58774 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.94□□□□□ -0.18
Tpm2P58774 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Tpm2P58774 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Tpm2P58774 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm2P58774 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm2P58774 Gm17230-201ENSMUST00000171194 3942 ntBASIC13.94□□□□□ -0.18
Tpm2P58774 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm2P58774 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm2P58774 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm2P58774 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.94□□□□□ -0.18
Tpm2P58774 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm2P58774 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm2P58774 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm2P58774 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm2P58774 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Tpm2P58774 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm2P58774 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm2P58774 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tpm2P58774 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms