Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Atxn1P54254 Arhgef33-207ENSMUST00000224966 490 ntBASIC12.11□□□□□ -0.47
Atxn1P54254 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.11□□□□□ -0.47
Atxn1P54254 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Atxn1P54254 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.11□□□□□ -0.47
Atxn1P54254 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.11□□□□□ -0.47
Atxn1P54254 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Atxn1P54254 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.11□□□□□ -0.47
Atxn1P54254 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.11□□□□□ -0.47
Atxn1P54254 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atxn1P54254 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atxn1P54254 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atxn1P54254 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atxn1P54254 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atxn1P54254 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atxn1P54254 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Atxn1P54254 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atxn1P54254 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Atxn1P54254 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atxn1P54254 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atxn1P54254 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Atxn1P54254 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atxn1P54254 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.1□□□□□ -0.47
Atxn1P54254 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atxn1P54254 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.1□□□□□ -0.47
Atxn1P54254 Gm22138-201ENSMUST00000158748 128 ntBASIC12.1□□□□□ -0.47
Atxn1P54254 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.1□□□□□ -0.47
Atxn1P54254 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.1□□□□□ -0.47
Atxn1P54254 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Atxn1P54254 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.1□□□□□ -0.47
Atxn1P54254 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atxn1P54254 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.1□□□□□ -0.47
Atxn1P54254 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.1□□□□□ -0.47
Atxn1P54254 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.1□□□□□ -0.47
Atxn1P54254 Gm42779-201ENSMUST00000198807 406 ntBASIC12.1□□□□□ -0.47
Atxn1P54254 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.1□□□□□ -0.47
Atxn1P54254 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.1□□□□□ -0.47
Atxn1P54254 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.1□□□□□ -0.47
Atxn1P54254 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atxn1P54254 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Atxn1P54254 Gm8325-201ENSMUST00000099086 453 ntBASIC12.1□□□□□ -0.47
Atxn1P54254 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.1□□□□□ -0.47
Atxn1P54254 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Atxn1P54254 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.1□□□□□ -0.47
Atxn1P54254 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.1□□□□□ -0.47
Atxn1P54254 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.1□□□□□ -0.47
Atxn1P54254 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.1□□□□□ -0.47
Atxn1P54254 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atxn1P54254 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.1□□□□□ -0.47
Atxn1P54254 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atxn1P54254 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atxn1P54254 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Atxn1P54254 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.1□□□□□ -0.47
Atxn1P54254 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atxn1P54254 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Atxn1P54254 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Atxn1P54254 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atxn1P54254 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atxn1P54254 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Atxn1P54254 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Atxn1P54254 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atxn1P54254 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Atxn1P54254 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atxn1P54254 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.09□□□□□ -0.47
Atxn1P54254 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Atxn1P54254 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atxn1P54254 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.09□□□□□ -0.47
Atxn1P54254 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.09□□□□□ -0.47
Atxn1P54254 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atxn1P54254 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.09□□□□□ -0.47
Atxn1P54254 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Atxn1P54254 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.09□□□□□ -0.47
Atxn1P54254 Gm9230-201ENSMUST00000188228 532 ntBASIC12.09□□□□□ -0.47
Atxn1P54254 Gm5733-201ENSMUST00000190232 939 ntBASIC12.09□□□□□ -0.47
Atxn1P54254 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC12.09□□□□□ -0.47
Atxn1P54254 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.09□□□□□ -0.47
Atxn1P54254 Gm4482-201ENSMUST00000200876 742 ntBASIC12.09□□□□□ -0.47
Atxn1P54254 Gm6905-201ENSMUST00000205729 511 ntBASIC12.09□□□□□ -0.47
Atxn1P54254 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atxn1P54254 Gm19091-201ENSMUST00000208120 978 ntBASIC12.09□□□□□ -0.47
Atxn1P54254 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atxn1P54254 Gm2517-201ENSMUST00000215651 348 ntBASIC12.09□□□□□ -0.47
Atxn1P54254 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atxn1P54254 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.09□□□□□ -0.47
Atxn1P54254 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms