Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.16□□□□□ -0.46
Fdft1P53798 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fdft1P53798 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Fdft1P53798 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fdft1P53798 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Fdft1P53798 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.16□□□□□ -0.46
Fdft1P53798 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fdft1P53798 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Fdft1P53798 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Fdft1P53798 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Fdft1P53798 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Fdft1P53798 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fdft1P53798 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Fdft1P53798 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Fdft1P53798 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fdft1P53798 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fdft1P53798 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.15□□□□□ -0.46
Fdft1P53798 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fdft1P53798 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fdft1P53798 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fdft1P53798 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Fdft1P53798 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Fdft1P53798 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fdft1P53798 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fdft1P53798 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.15□□□□□ -0.46
Fdft1P53798 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.15□□□□□ -0.46
Fdft1P53798 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fdft1P53798 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Fdft1P53798 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.15□□□□□ -0.46
Fdft1P53798 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fdft1P53798 Gm13875-201ENSMUST00000120162 282 ntBASIC12.15□□□□□ -0.46
Fdft1P53798 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.15□□□□□ -0.46
Fdft1P53798 Gm8062-201ENSMUST00000139696 444 ntBASIC12.15□□□□□ -0.46
Fdft1P53798 Gm37201-201ENSMUST00000191845 523 ntBASIC12.15□□□□□ -0.46
Fdft1P53798 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.15□□□□□ -0.46
Fdft1P53798 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.15□□□□□ -0.46
Fdft1P53798 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fdft1P53798 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Fdft1P53798 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fdft1P53798 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Fdft1P53798 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fdft1P53798 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Fdft1P53798 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Fdft1P53798 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fdft1P53798 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.15□□□□□ -0.46
Fdft1P53798 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fdft1P53798 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fdft1P53798 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Fdft1P53798 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fdft1P53798 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
Fdft1P53798 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Fdft1P53798 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Fdft1P53798 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Fdft1P53798 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fdft1P53798 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Fdft1P53798 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fdft1P53798 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fdft1P53798 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fdft1P53798 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fdft1P53798 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Fdft1P53798 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fdft1P53798 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.14□□□□□ -0.47
Fdft1P53798 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fdft1P53798 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fdft1P53798 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fdft1P53798 Gm10434-201ENSMUST00000101158 471 ntBASIC12.14□□□□□ -0.47
Fdft1P53798 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fdft1P53798 Gm12058-201ENSMUST00000118614 437 ntBASIC12.14□□□□□ -0.47
Fdft1P53798 Gm14999-201ENSMUST00000121039 624 ntBASIC12.14□□□□□ -0.47
Fdft1P53798 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fdft1P53798 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fdft1P53798 Gm23119-201ENSMUST00000158610 140 ntBASIC12.14□□□□□ -0.47
Fdft1P53798 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Fdft1P53798 Mir7085-201ENSMUST00000184353 66 ntBASIC12.14□□□□□ -0.47
Fdft1P53798 Gm38158-201ENSMUST00000194617 339 ntBASIC12.14□□□□□ -0.47
Fdft1P53798 AY702102-202ENSMUST00000194651 1173 ntBASIC12.14□□□□□ -0.47
Fdft1P53798 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.14□□□□□ -0.47
Fdft1P53798 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.14□□□□□ -0.47
Fdft1P53798 Gm19309-201ENSMUST00000218295 205 ntBASIC12.14□□□□□ -0.47
Fdft1P53798 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fdft1P53798 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fdft1P53798 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fdft1P53798 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fdft1P53798 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Fdft1P53798 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.14□□□□□ -0.47
Fdft1P53798 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fdft1P53798 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fdft1P53798 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fdft1P53798 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fdft1P53798 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fdft1P53798 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fdft1P53798 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fdft1P53798 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fdft1P53798 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.14□□□□□ -0.47
Fdft1P53798 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fdft1P53798 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fdft1P53798 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.14□□□□□ -0.47
Fdft1P53798 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fdft1P53798 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fdft1P53798 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms