Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx3P50481 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx3P50481 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx3P50481 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx3P50481 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx3P50481 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Lhx3P50481 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx3P50481 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx3P50481 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Lhx3P50481 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx3P50481 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx3P50481 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx3P50481 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx3P50481 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx3P50481 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx3P50481 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Lhx3P50481 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx3P50481 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx3P50481 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx3P50481 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.29□□□□□ -0.44
Lhx3P50481 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx3P50481 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx3P50481 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx3P50481 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx3P50481 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx3P50481 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx3P50481 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx3P50481 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Lhx3P50481 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.28□□□□□ -0.44
Lhx3P50481 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx3P50481 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx3P50481 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Lhx3P50481 Gm15004-201ENSMUST00000119192 630 ntBASIC12.28□□□□□ -0.44
Lhx3P50481 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx3P50481 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx3P50481 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Lhx3P50481 Gm17040-202ENSMUST00000170597 889 ntBASIC12.28□□□□□ -0.44
Lhx3P50481 Gm25732-201ENSMUST00000175168 60 ntBASIC12.28□□□□□ -0.44
Lhx3P50481 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
Lhx3P50481 Gm27530-201ENSMUST00000184096 98 ntBASIC12.28□□□□□ -0.44
Lhx3P50481 Gm9136-201ENSMUST00000193368 454 ntBASIC12.28□□□□□ -0.44
Lhx3P50481 Gm43184-201ENSMUST00000197247 542 ntBASIC12.28□□□□□ -0.44
Lhx3P50481 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.28□□□□□ -0.44
Lhx3P50481 Gm4157-201ENSMUST00000211647 679 ntBASIC12.28□□□□□ -0.44
Lhx3P50481 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.28□□□□□ -0.44
Lhx3P50481 Gm5705-201ENSMUST00000066241 711 ntBASIC12.28□□□□□ -0.44
Lhx3P50481 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx3P50481 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx3P50481 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx3P50481 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx3P50481 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx3P50481 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx3P50481 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Lhx3P50481 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx3P50481 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.28□□□□□ -0.44
Lhx3P50481 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.28□□□□□ -0.44
Lhx3P50481 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx3P50481 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lhx3P50481 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lhx3P50481 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Lhx3P50481 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.27□□□□□ -0.44
Lhx3P50481 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Lhx3P50481 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lhx3P50481 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lhx3P50481 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lhx3P50481 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Lhx3P50481 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Lhx3P50481 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lhx3P50481 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx3P50481 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx3P50481 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx3P50481 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Lhx3P50481 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.27□□□□□ -0.45
Lhx3P50481 Mir7677-201ENSMUST00000184226 67 ntBASIC12.27□□□□□ -0.45
Lhx3P50481 Mir6927-201ENSMUST00000184494 71 ntBASIC12.27□□□□□ -0.45
Lhx3P50481 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx3P50481 Gm37466-201ENSMUST00000195692 652 ntBASIC12.27□□□□□ -0.45
Lhx3P50481 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx3P50481 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Lhx3P50481 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx3P50481 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.27□□□□□ -0.45
Lhx3P50481 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx3P50481 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.27□□□□□ -0.45
Lhx3P50481 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Lhx3P50481 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.27□□□□□ -0.45
Lhx3P50481 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.27□□□□□ -0.45
Lhx3P50481 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx3P50481 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx3P50481 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx3P50481 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx3P50481 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx3P50481 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx3P50481 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.27□□□□□ -0.45
Lhx3P50481 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx3P50481 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Lhx3P50481 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx3P50481 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx3P50481 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.27□□□□□ -0.45
Lhx3P50481 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx3P50481 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms