Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shmt1P50431 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shmt1P50431 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Shmt1P50431 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.84□□□□□ -0.35
Shmt1P50431 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shmt1P50431 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shmt1P50431 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shmt1P50431 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shmt1P50431 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Shmt1P50431 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shmt1P50431 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shmt1P50431 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.84□□□□□ -0.35
Shmt1P50431 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shmt1P50431 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Shmt1P50431 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shmt1P50431 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shmt1P50431 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Shmt1P50431 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Shmt1P50431 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Shmt1P50431 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Shmt1P50431 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.83□□□□□ -0.35
Shmt1P50431 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Shmt1P50431 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.83□□□□□ -0.35
Shmt1P50431 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.83□□□□□ -0.36
Shmt1P50431 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Shmt1P50431 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Shmt1P50431 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shmt1P50431 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.83□□□□□ -0.36
Shmt1P50431 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.83□□□□□ -0.36
Shmt1P50431 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.83□□□□□ -0.36
Shmt1P50431 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shmt1P50431 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shmt1P50431 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Shmt1P50431 Gm5419-201ENSMUST00000119301 527 ntBASIC12.83□□□□□ -0.36
Shmt1P50431 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Shmt1P50431 Gm12566-201ENSMUST00000121479 359 ntBASIC12.83□□□□□ -0.36
Shmt1P50431 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.83□□□□□ -0.36
Shmt1P50431 Mir3547-201ENSMUST00000175461 88 ntBASIC12.83□□□□□ -0.36
Shmt1P50431 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Shmt1P50431 Gm27552-201ENSMUST00000183351 62 ntBASIC12.83□□□□□ -0.36
Shmt1P50431 Gm27844-201ENSMUST00000183613 62 ntBASIC12.83□□□□□ -0.36
Shmt1P50431 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.83□□□□□ -0.36
Shmt1P50431 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.83□□□□□ -0.36
Shmt1P50431 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.83□□□□□ -0.36
Shmt1P50431 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.83□□□□□ -0.36
Shmt1P50431 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shmt1P50431 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Shmt1P50431 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shmt1P50431 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shmt1P50431 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Shmt1P50431 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shmt1P50431 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shmt1P50431 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shmt1P50431 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.83□□□□□ -0.36
Shmt1P50431 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.83□□□□□ -0.36
Shmt1P50431 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shmt1P50431 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shmt1P50431 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shmt1P50431 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shmt1P50431 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shmt1P50431 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shmt1P50431 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Shmt1P50431 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shmt1P50431 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shmt1P50431 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Shmt1P50431 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shmt1P50431 Gm22133-201ENSMUST00000102082 109 ntBASIC12.82□□□□□ -0.36
Shmt1P50431 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.82□□□□□ -0.36
Shmt1P50431 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.82□□□□□ -0.36
Shmt1P50431 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.82□□□□□ -0.36
Shmt1P50431 Gm25732-201ENSMUST00000175168 60 ntBASIC12.82□□□□□ -0.36
Shmt1P50431 Gm27530-201ENSMUST00000184096 98 ntBASIC12.82□□□□□ -0.36
Shmt1P50431 Gm18893-201ENSMUST00000198416 943 ntBASIC12.82□□□□□ -0.36
Shmt1P50431 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Shmt1P50431 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shmt1P50431 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.82□□□□□ -0.36
Shmt1P50431 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shmt1P50431 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.82□□□□□ -0.36
Shmt1P50431 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Shmt1P50431 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Shmt1P50431 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Shmt1P50431 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Shmt1P50431 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Shmt1P50431 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.82□□□□□ -0.36
Shmt1P50431 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Shmt1P50431 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shmt1P50431 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Shmt1P50431 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shmt1P50431 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Shmt1P50431 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shmt1P50431 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shmt1P50431 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.81□□□□□ -0.36
Shmt1P50431 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.81□□□□□ -0.36
Shmt1P50431 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shmt1P50431 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.81□□□□□ -0.36
Shmt1P50431 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shmt1P50431 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shmt1P50431 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shmt1P50431 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Shmt1P50431 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms