Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SftpbP50405 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SftpbP50405 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.41□□□□□ -0.42
SftpbP50405 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SftpbP50405 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.41□□□□□ -0.42
SftpbP50405 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.41□□□□□ -0.42
SftpbP50405 Gm13342-201ENSMUST00000121055 207 ntBASIC12.41□□□□□ -0.42
SftpbP50405 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.41□□□□□ -0.42
SftpbP50405 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.41□□□□□ -0.42
SftpbP50405 Gm25261-201ENSMUST00000157416 134 ntBASIC12.41□□□□□ -0.42
SftpbP50405 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.41□□□□□ -0.42
SftpbP50405 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.41□□□□□ -0.42
SftpbP50405 Gm8602-201ENSMUST00000184045 607 ntBASIC12.41□□□□□ -0.42
SftpbP50405 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.41□□□□□ -0.42
SftpbP50405 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.41□□□□□ -0.42
SftpbP50405 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SftpbP50405 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SftpbP50405 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.41□□□□□ -0.42
SftpbP50405 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.41□□□□□ -0.42
SftpbP50405 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.41□□□□□ -0.42
SftpbP50405 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.41□□□□□ -0.42
SftpbP50405 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
SftpbP50405 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.41□□□□□ -0.42
SftpbP50405 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.41□□□□□ -0.42
SftpbP50405 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpbP50405 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.4□□□□□ -0.42
SftpbP50405 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SftpbP50405 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SftpbP50405 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SftpbP50405 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SftpbP50405 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.4□□□□□ -0.42
SftpbP50405 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SftpbP50405 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SftpbP50405 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SftpbP50405 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SftpbP50405 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SftpbP50405 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SftpbP50405 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
SftpbP50405 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.4□□□□□ -0.42
SftpbP50405 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.4□□□□□ -0.42
SftpbP50405 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.4□□□□□ -0.42
SftpbP50405 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.4□□□□□ -0.42
SftpbP50405 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.4□□□□□ -0.42
SftpbP50405 Gm5781-201ENSMUST00000219792 443 ntBASIC12.4□□□□□ -0.42
SftpbP50405 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.4□□□□□ -0.42
SftpbP50405 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SftpbP50405 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.4□□□□□ -0.42
SftpbP50405 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
SftpbP50405 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SftpbP50405 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SftpbP50405 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SftpbP50405 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SftpbP50405 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
SftpbP50405 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.4□□□□□ -0.42
SftpbP50405 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SftpbP50405 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SftpbP50405 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SftpbP50405 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.4□□□□□ -0.42
SftpbP50405 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SftpbP50405 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SftpbP50405 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SftpbP50405 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SftpbP50405 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SftpbP50405 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SftpbP50405 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SftpbP50405 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms