Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brca1P48754 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brca1P48754 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Brca1P48754 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Brca1P48754 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brca1P48754 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brca1P48754 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.4□□□□□ -0.26
Brca1P48754 Gm6831-202ENSMUST00000213025 1673 ntBASIC13.4□□□□□ -0.26
Brca1P48754 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.4□□□□□ -0.26
Brca1P48754 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brca1P48754 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Brca1P48754 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Brca1P48754 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brca1P48754 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brca1P48754 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Brca1P48754 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brca1P48754 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC13.4□□□□□ -0.26
Brca1P48754 Gm12663-201ENSMUST00000118481 958 ntBASIC13.4□□□□□ -0.26
Brca1P48754 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC13.4□□□□□ -0.26
Brca1P48754 Gm17825-201ENSMUST00000206836 794 ntBASIC13.4□□□□□ -0.26
Brca1P48754 CT009527.1-201ENSMUST00000224205 339 ntBASIC13.4□□□□□ -0.26
Brca1P48754 Arhgef33-210ENSMUST00000225548 456 ntBASIC13.4□□□□□ -0.26
Brca1P48754 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Brca1P48754 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Brca1P48754 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brca1P48754 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brca1P48754 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Brca1P48754 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brca1P48754 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brca1P48754 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Brca1P48754 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brca1P48754 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brca1P48754 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Brca1P48754 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Brca1P48754 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brca1P48754 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Brca1P48754 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Brca1P48754 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Brca1P48754 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC13.4□□□□□ -0.27
Brca1P48754 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Brca1P48754 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Brca1P48754 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Brca1P48754 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Brca1P48754 Mir181d-201ENSMUST00000102383 72 ntBASIC13.39□□□□□ -0.27
Brca1P48754 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC13.39□□□□□ -0.27
Brca1P48754 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC13.39□□□□□ -0.27
Brca1P48754 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC13.39□□□□□ -0.27
Brca1P48754 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brca1P48754 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.39□□□□□ -0.27
Brca1P48754 Gm17214-201ENSMUST00000164501 541 ntBASIC13.39□□□□□ -0.27
Brca1P48754 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC13.39□□□□□ -0.27
Brca1P48754 Gm5700-201ENSMUST00000191483 989 ntBASIC13.39□□□□□ -0.27
Brca1P48754 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Brca1P48754 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC13.39□□□□□ -0.27
Brca1P48754 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brca1P48754 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Brca1P48754 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brca1P48754 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Brca1P48754 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Brca1P48754 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC13.39□□□□□ -0.27
Brca1P48754 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brca1P48754 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brca1P48754 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brca1P48754 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.39□□□□□ -0.27
Brca1P48754 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Brca1P48754 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.39□□□□□ -0.27
Brca1P48754 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.39□□□□□ -0.27
Brca1P48754 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Brca1P48754 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC13.39□□□□□ -0.27
Brca1P48754 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Brca1P48754 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.39□□□□□ -0.27
Brca1P48754 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Brca1P48754 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brca1P48754 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Brca1P48754 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brca1P48754 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brca1P48754 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Brca1P48754 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brca1P48754 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brca1P48754 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brca1P48754 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Brca1P48754 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brca1P48754 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brca1P48754 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Brca1P48754 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Brca1P48754 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Brca1P48754 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC13.39□□□□□ -0.27
Brca1P48754 Gm9166-201ENSMUST00000120293 561 ntBASIC13.39□□□□□ -0.27
Brca1P48754 Gm11960-201ENSMUST00000122068 925 ntBASIC13.39□□□□□ -0.27
Brca1P48754 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.39□□□□□ -0.27
Brca1P48754 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Brca1P48754 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.39□□□□□ -0.27
Brca1P48754 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC13.39□□□□□ -0.27
Brca1P48754 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC13.39□□□□□ -0.27
Brca1P48754 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC13.39□□□□□ -0.27
Brca1P48754 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC13.39□□□□□ -0.27
Brca1P48754 Gm45758-201ENSMUST00000212448 1006 ntBASIC13.39□□□□□ -0.27
Brca1P48754 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC13.39□□□□□ -0.27
Brca1P48754 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Brca1P48754 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms