Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Rfx3P48381 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.99□□□□□ -0.65
Rfx3P48381 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Rfx3P48381 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rfx3P48381 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rfx3P48381 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rfx3P48381 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rfx3P48381 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rfx3P48381 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rfx3P48381 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rfx3P48381 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Rfx3P48381 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Rfx3P48381 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rfx3P48381 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rfx3P48381 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rfx3P48381 Gm13226-201ENSMUST00000117838 404 ntBASIC10.98□□□□□ -0.65
Rfx3P48381 Gm25261-201ENSMUST00000157416 134 ntBASIC10.98□□□□□ -0.65
Rfx3P48381 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.98□□□□□ -0.65
Rfx3P48381 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.98□□□□□ -0.65
Rfx3P48381 Gm6222-202ENSMUST00000182143 629 ntBASIC10.98□□□□□ -0.65
Rfx3P48381 Gm9022-201ENSMUST00000182482 992 ntBASIC10.98□□□□□ -0.65
Rfx3P48381 Gm43630-201ENSMUST00000201550 776 ntBASIC10.98□□□□□ -0.65
Rfx3P48381 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.98□□□□□ -0.65
Rfx3P48381 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rfx3P48381 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rfx3P48381 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Rfx3P48381 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Rfx3P48381 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
Rfx3P48381 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rfx3P48381 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.98□□□□□ -0.65
Rfx3P48381 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rfx3P48381 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rfx3P48381 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rfx3P48381 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Rfx3P48381 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Rfx3P48381 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rfx3P48381 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rfx3P48381 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rfx3P48381 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rfx3P48381 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rfx3P48381 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rfx3P48381 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Rfx3P48381 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rfx3P48381 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rfx3P48381 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.98□□□□□ -0.65
Rfx3P48381 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rfx3P48381 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
Rfx3P48381 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.97□□□□□ -0.65
Rfx3P48381 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Rfx3P48381 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.97□□□□□ -0.65
Rfx3P48381 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Rfx3P48381 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Rfx3P48381 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Rfx3P48381 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Gm11597-201ENSMUST00000121423 964 ntBASIC10.97□□□□□ -0.65
Rfx3P48381 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.97□□□□□ -0.65
Rfx3P48381 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.97□□□□□ -0.65
Rfx3P48381 Gm3890-201ENSMUST00000182416 207 ntBASIC10.97□□□□□ -0.65
Rfx3P48381 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.97□□□□□ -0.65
Rfx3P48381 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Rfx3P48381 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Rfx3P48381 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rfx3P48381 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms