Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox18P43680 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox18P43680 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.85□□□□□ -0.51
Sox18P43680 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox18P43680 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox18P43680 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.84□□□□□ -0.51
Sox18P43680 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox18P43680 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox18P43680 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox18P43680 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox18P43680 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.84□□□□□ -0.51
Sox18P43680 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.84□□□□□ -0.51
Sox18P43680 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Sox18P43680 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox18P43680 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox18P43680 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox18P43680 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.84□□□□□ -0.51
Sox18P43680 Gm38325-201ENSMUST00000194507 1377 ntBASIC11.84□□□□□ -0.51
Sox18P43680 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox18P43680 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox18P43680 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox18P43680 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox18P43680 Gm22133-201ENSMUST00000102082 109 ntBASIC11.84□□□□□ -0.51
Sox18P43680 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox18P43680 Gm13600-201ENSMUST00000117949 744 ntBASIC11.84□□□□□ -0.51
Sox18P43680 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Sox18P43680 Gm12656-201ENSMUST00000118149 577 ntBASIC11.84□□□□□ -0.51
Sox18P43680 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox18P43680 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox18P43680 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox18P43680 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox18P43680 Gm5733-201ENSMUST00000190232 939 ntBASIC11.84□□□□□ -0.51
Sox18P43680 Gm19091-201ENSMUST00000208120 978 ntBASIC11.84□□□□□ -0.51
Sox18P43680 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC11.84□□□□□ -0.51
Sox18P43680 Gm17827-201ENSMUST00000211825 742 ntBASIC11.84□□□□□ -0.51
Sox18P43680 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.84□□□□□ -0.51
Sox18P43680 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.84□□□□□ -0.51
Sox18P43680 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.84□□□□□ -0.51
Sox18P43680 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.84□□□□□ -0.51
Sox18P43680 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Sox18P43680 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
Sox18P43680 Speer4c-201ENSMUST00000095005 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox18P43680 Speer4d-201ENSMUST00000095006 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox18P43680 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox18P43680 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox18P43680 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox18P43680 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Sox18P43680 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox18P43680 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox18P43680 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.84□□□□□ -0.51
Sox18P43680 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox18P43680 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox18P43680 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox18P43680 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox18P43680 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox18P43680 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Sox18P43680 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Sox18P43680 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Sox18P43680 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Sox18P43680 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.83□□□□□ -0.51
Sox18P43680 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.83□□□□□ -0.51
Sox18P43680 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Sox18P43680 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.83□□□□□ -0.52
Sox18P43680 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Sox18P43680 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox18P43680 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox18P43680 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox18P43680 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox18P43680 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox18P43680 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Sox18P43680 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox18P43680 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox18P43680 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Sox18P43680 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.83□□□□□ -0.52
Sox18P43680 Gm11451-201ENSMUST00000118946 630 ntBASIC11.83□□□□□ -0.52
Sox18P43680 Gm25545-201ENSMUST00000122673 323 ntBASIC11.83□□□□□ -0.52
Sox18P43680 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox18P43680 Gm23085-201ENSMUST00000157849 293 ntBASIC11.83□□□□□ -0.52
Sox18P43680 Gm16296-201ENSMUST00000159905 325 ntBASIC11.83□□□□□ -0.52
Sox18P43680 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC11.83□□□□□ -0.52
Sox18P43680 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.83□□□□□ -0.52
Sox18P43680 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Sox18P43680 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox18P43680 Gm8902-201ENSMUST00000174341 1096 ntBASIC11.83□□□□□ -0.52
Sox18P43680 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Sox18P43680 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC11.83□□□□□ -0.52
Sox18P43680 Gm42518-201ENSMUST00000196277 938 ntBASIC11.83□□□□□ -0.52
Sox18P43680 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.83□□□□□ -0.52
Sox18P43680 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.83□□□□□ -0.52
Sox18P43680 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC11.83□□□□□ -0.52
Sox18P43680 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox18P43680 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox18P43680 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC11.83□□□□□ -0.52
Sox18P43680 Gm2517-201ENSMUST00000215651 348 ntBASIC11.83□□□□□ -0.52
Sox18P43680 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC11.83□□□□□ -0.52
Sox18P43680 AC159376.1-201ENSMUST00000218504 630 ntBASIC11.83□□□□□ -0.52
Sox18P43680 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox18P43680 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox18P43680 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.83□□□□□ -0.52
Sox18P43680 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms