Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Sox6P40645 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.43□□□□□ -0.58
Sox6P40645 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Sox6P40645 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.43□□□□□ -0.58
Sox6P40645 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.43□□□□□ -0.58
Sox6P40645 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Sox6P40645 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.43□□□□□ -0.58
Sox6P40645 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Sox6P40645 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.43□□□□□ -0.58
Sox6P40645 Gm27514-201ENSMUST00000183692 110 ntBASIC11.43□□□□□ -0.58
Sox6P40645 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.43□□□□□ -0.58
Sox6P40645 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.43□□□□□ -0.58
Sox6P40645 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.43□□□□□ -0.58
Sox6P40645 Gm18584-201ENSMUST00000203098 964 ntBASIC11.43□□□□□ -0.58
Sox6P40645 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.43□□□□□ -0.58
Sox6P40645 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Gm32025-201ENSMUST00000217960 307 ntBASIC11.43□□□□□ -0.58
Sox6P40645 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.43□□□□□ -0.58
Sox6P40645 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sox6P40645 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sox6P40645 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sox6P40645 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.43□□□□□ -0.58
Sox6P40645 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.43□□□□□ -0.58
Sox6P40645 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Sox6P40645 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Sox6P40645 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox6P40645 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox6P40645 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox6P40645 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox6P40645 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox6P40645 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sox6P40645 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.42□□□□□ -0.58
Sox6P40645 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox6P40645 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.42□□□□□ -0.58
Sox6P40645 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox6P40645 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sox6P40645 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox6P40645 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox6P40645 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox6P40645 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox6P40645 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Sox6P40645 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox6P40645 Snord83b-201ENSMUST00000104546 94 ntBASIC11.42□□□□□ -0.58
Sox6P40645 Gm12957-201ENSMUST00000117835 377 ntBASIC11.42□□□□□ -0.58
Sox6P40645 Gm13492-201ENSMUST00000119772 665 ntBASIC11.42□□□□□ -0.58
Sox6P40645 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.42□□□□□ -0.58
Sox6P40645 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox6P40645 Mir7085-201ENSMUST00000184353 66 ntBASIC11.42□□□□□ -0.58
Sox6P40645 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox6P40645 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.42□□□□□ -0.58
Sox6P40645 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox6P40645 Snora73a-201ENSMUST00000082453 205 ntBASIC11.42□□□□□ -0.58
Sox6P40645 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox6P40645 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox6P40645 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox6P40645 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox6P40645 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox6P40645 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox6P40645 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sox6P40645 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox6P40645 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox6P40645 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox6P40645 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox6P40645 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.42□□□□□ -0.58
Sox6P40645 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Sox6P40645 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox6P40645 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.41□□□□□ -0.58
Sox6P40645 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.41□□□□□ -0.58
Sox6P40645 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Sox6P40645 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms