Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Gm16166-201ENSMUST00000118291 787 ntBASIC11.22□□□□□ -0.61
Sftpa1P35242 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.22□□□□□ -0.61
Sftpa1P35242 Gm13263-201ENSMUST00000121271 838 ntBASIC11.22□□□□□ -0.61
Sftpa1P35242 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Gm23045-201ENSMUST00000175041 96 ntBASIC11.22□□□□□ -0.61
Sftpa1P35242 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Gm17889-201ENSMUST00000198410 598 ntBASIC11.22□□□□□ -0.61
Sftpa1P35242 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sftpa1P35242 Gm2875-201ENSMUST00000211333 360 ntBASIC11.22□□□□□ -0.61
Sftpa1P35242 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.22□□□□□ -0.61
Sftpa1P35242 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.22□□□□□ -0.61
Sftpa1P35242 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Sftpa1P35242 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.22□□□□□ -0.61
Sftpa1P35242 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Sftpa1P35242 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.22□□□□□ -0.61
Sftpa1P35242 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Sftpa1P35242 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sftpa1P35242 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sftpa1P35242 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sftpa1P35242 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sftpa1P35242 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sftpa1P35242 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sftpa1P35242 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sftpa1P35242 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.21□□□□□ -0.61
Sftpa1P35242 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sftpa1P35242 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sftpa1P35242 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sftpa1P35242 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sftpa1P35242 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sftpa1P35242 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sftpa1P35242 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sftpa1P35242 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Sftpa1P35242 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Sftpa1P35242 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Sftpa1P35242 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.21□□□□□ -0.61
Sftpa1P35242 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sftpa1P35242 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sftpa1P35242 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sftpa1P35242 Gm12969-201ENSMUST00000120199 1004 ntBASIC11.21□□□□□ -0.61
Sftpa1P35242 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.21□□□□□ -0.61
Sftpa1P35242 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.21□□□□□ -0.61
Sftpa1P35242 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC11.21□□□□□ -0.61
Sftpa1P35242 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sftpa1P35242 Gm4654-201ENSMUST00000183305 982 ntBASIC11.21□□□□□ -0.61
Sftpa1P35242 Gm8956-201ENSMUST00000203939 825 ntBASIC11.21□□□□□ -0.61
Sftpa1P35242 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sftpa1P35242 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
Sftpa1P35242 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sftpa1P35242 Gm5705-201ENSMUST00000066241 711 ntBASIC11.21□□□□□ -0.61
Sftpa1P35242 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.21□□□□□ -0.61
Sftpa1P35242 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sftpa1P35242 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sftpa1P35242 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sftpa1P35242 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sftpa1P35242 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sftpa1P35242 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sftpa1P35242 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
Sftpa1P35242 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sftpa1P35242 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sftpa1P35242 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sftpa1P35242 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sftpa1P35242 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.21□□□□□ -0.62
Sftpa1P35242 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sftpa1P35242 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sftpa1P35242 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sftpa1P35242 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Sftpa1P35242 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Sftpa1P35242 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sftpa1P35242 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sftpa1P35242 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.2□□□□□ -0.62
Sftpa1P35242 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.2□□□□□ -0.62
Sftpa1P35242 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sftpa1P35242 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.2□□□□□ -0.62
Sftpa1P35242 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sftpa1P35242 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sftpa1P35242 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Sftpa1P35242 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sftpa1P35242 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sftpa1P35242 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms