Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxc5P32043 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxc5P32043 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.28□□□□□ -0.6
Hoxc5P32043 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Hoxc5P32043 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 Gm23931-201ENSMUST00000103842 109 ntBASIC11.28□□□□□ -0.6
Hoxc5P32043 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.28□□□□□ -0.6
Hoxc5P32043 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.28□□□□□ -0.6
Hoxc5P32043 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.28□□□□□ -0.6
Hoxc5P32043 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Hoxc5P32043 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.28□□□□□ -0.6
Hoxc5P32043 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Hoxc5P32043 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Hoxc5P32043 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Hoxc5P32043 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Hoxc5P32043 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Hoxc5P32043 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Hoxc5P32043 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Hoxc5P32043 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxc5P32043 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Hoxc5P32043 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.27□□□□□ -0.6
Hoxc5P32043 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.27□□□□□ -0.6
Hoxc5P32043 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Hoxc5P32043 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hoxc5P32043 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.27□□□□□ -0.6
Hoxc5P32043 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
Hoxc5P32043 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Hoxc5P32043 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc5P32043 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.27□□□□□ -0.61
Hoxc5P32043 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc5P32043 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.27□□□□□ -0.61
Hoxc5P32043 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Hoxc5P32043 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc5P32043 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.27□□□□□ -0.61
Hoxc5P32043 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.27□□□□□ -0.61
Hoxc5P32043 Gm24548-201ENSMUST00000158650 108 ntBASIC11.27□□□□□ -0.61
Hoxc5P32043 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc5P32043 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.27□□□□□ -0.61
Hoxc5P32043 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.27□□□□□ -0.61
Hoxc5P32043 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Hoxc5P32043 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.27□□□□□ -0.61
Hoxc5P32043 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.27□□□□□ -0.61
Hoxc5P32043 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.27□□□□□ -0.61
Hoxc5P32043 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc5P32043 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc5P32043 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.27□□□□□ -0.61
Hoxc5P32043 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Hoxc5P32043 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc5P32043 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Hoxc5P32043 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc5P32043 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.27□□□□□ -0.61
Hoxc5P32043 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc5P32043 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc5P32043 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.27□□□□□ -0.61
Hoxc5P32043 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc5P32043 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxc5P32043 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc5P32043 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc5P32043 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc5P32043 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc5P32043 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc5P32043 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc5P32043 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc5P32043 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Hoxc5P32043 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc5P32043 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Hoxc5P32043 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc5P32043 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc5P32043 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc5P32043 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxc5P32043 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms