Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp3P28862 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp3P28862 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp3P28862 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp3P28862 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp3P28862 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.97□□□□□ -0.33
Mmp3P28862 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.97□□□□□ -0.33
Mmp3P28862 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp3P28862 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.97□□□□□ -0.33
Mmp3P28862 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.97□□□□□ -0.33
Mmp3P28862 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Mmp3P28862 Gm37835-201ENSMUST00000193305 361 ntBASIC12.97□□□□□ -0.33
Mmp3P28862 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.97□□□□□ -0.33
Mmp3P28862 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp3P28862 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp3P28862 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.97□□□□□ -0.33
Mmp3P28862 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Mmp3P28862 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp3P28862 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp3P28862 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp3P28862 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp3P28862 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Mmp3P28862 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp3P28862 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp3P28862 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp3P28862 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Mmp3P28862 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp3P28862 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Mmp3P28862 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp3P28862 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp3P28862 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Mmp3P28862 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Mmp3P28862 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Mmp3P28862 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp3P28862 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Mmp3P28862 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp3P28862 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp3P28862 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Mmp3P28862 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Mmp3P28862 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp3P28862 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp3P28862 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Mmp3P28862 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp3P28862 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Mmp3P28862 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp3P28862 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp3P28862 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.96□□□□□ -0.33
Mmp3P28862 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp3P28862 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp3P28862 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp3P28862 Gm4310-201ENSMUST00000177847 889 ntBASIC12.96□□□□□ -0.33
Mmp3P28862 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp3P28862 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp3P28862 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp3P28862 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp3P28862 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.96□□□□□ -0.33
Mmp3P28862 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp3P28862 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp3P28862 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Mmp3P28862 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Mmp3P28862 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Mmp3P28862 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Mmp3P28862 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Mmp3P28862 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Mmp3P28862 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Mmp3P28862 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Mmp3P28862 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Mmp3P28862 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.96□□□□□ -0.34
Mmp3P28862 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Mmp3P28862 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Mmp3P28862 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Mmp3P28862 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp3P28862 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp3P28862 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Mmp3P28862 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Mmp3P28862 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp3P28862 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Mmp3P28862 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.95□□□□□ -0.34
Mmp3P28862 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Mmp3P28862 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp3P28862 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp3P28862 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp3P28862 Gm15131-201ENSMUST00000119124 595 ntBASIC12.95□□□□□ -0.34
Mmp3P28862 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.95□□□□□ -0.34
Mmp3P28862 Gm15595-201ENSMUST00000120840 961 ntBASIC12.95□□□□□ -0.34
Mmp3P28862 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.95□□□□□ -0.34
Mmp3P28862 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.95□□□□□ -0.34
Mmp3P28862 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.95□□□□□ -0.34
Mmp3P28862 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.95□□□□□ -0.34
Mmp3P28862 Gm19459-201ENSMUST00000176240 835 ntBASIC12.95□□□□□ -0.34
Mmp3P28862 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Mmp3P28862 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.95□□□□□ -0.34
Mmp3P28862 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.95□□□□□ -0.34
Mmp3P28862 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.95□□□□□ -0.34
Mmp3P28862 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.95□□□□□ -0.34
Mmp3P28862 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Mmp3P28862 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp3P28862 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp3P28862 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Mmp3P28862 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms