Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
Nfkb1P25799 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nfkb1P25799 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nfkb1P25799 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nfkb1P25799 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nfkb1P25799 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Nfkb1P25799 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nfkb1P25799 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.5□□□□□ -0.41
Nfkb1P25799 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.5□□□□□ -0.41
Nfkb1P25799 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nfkb1P25799 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nfkb1P25799 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.5□□□□□ -0.41
Nfkb1P25799 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nfkb1P25799 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Nfkb1P25799 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Nfkb1P25799 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Nfkb1P25799 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nfkb1P25799 Paupar-201ENSMUST00000194826 3482 ntBASIC12.5□□□□□ -0.41
Nfkb1P25799 Gm12176-201ENSMUST00000121420 875 ntBASIC12.5□□□□□ -0.41
Nfkb1P25799 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.5□□□□□ -0.41
Nfkb1P25799 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.5□□□□□ -0.41
Nfkb1P25799 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.5□□□□□ -0.41
Nfkb1P25799 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.5□□□□□ -0.41
Nfkb1P25799 Gm18038-201ENSMUST00000197900 485 ntBASIC12.5□□□□□ -0.41
Nfkb1P25799 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC12.5□□□□□ -0.41
Nfkb1P25799 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nfkb1P25799 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.5□□□□□ -0.41
Nfkb1P25799 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.5□□□□□ -0.41
Nfkb1P25799 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.5□□□□□ -0.41
Nfkb1P25799 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Nfkb1P25799 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Nfkb1P25799 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nfkb1P25799 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nfkb1P25799 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nfkb1P25799 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nfkb1P25799 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nfkb1P25799 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nfkb1P25799 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nfkb1P25799 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nfkb1P25799 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nfkb1P25799 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nfkb1P25799 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Nfkb1P25799 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Nfkb1P25799 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nfkb1P25799 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nfkb1P25799 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nfkb1P25799 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nfkb1P25799 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Nfkb1P25799 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Nfkb1P25799 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nfkb1P25799 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nfkb1P25799 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Nfkb1P25799 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Nfkb1P25799 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Nfkb1P25799 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nfkb1P25799 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.49□□□□□ -0.41
Nfkb1P25799 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Nfkb1P25799 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nfkb1P25799 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Nfkb1P25799 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
Nfkb1P25799 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.49□□□□□ -0.41
Nfkb1P25799 Gm11450-201ENSMUST00000121144 333 ntBASIC12.49□□□□□ -0.41
Nfkb1P25799 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nfkb1P25799 Gm23699-201ENSMUST00000158835 135 ntBASIC12.49□□□□□ -0.41
Nfkb1P25799 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Nfkb1P25799 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.49□□□□□ -0.41
Nfkb1P25799 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.49□□□□□ -0.41
Nfkb1P25799 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.49□□□□□ -0.41
Nfkb1P25799 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.49□□□□□ -0.41
Nfkb1P25799 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.49□□□□□ -0.41
Nfkb1P25799 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.49□□□□□ -0.41
Nfkb1P25799 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nfkb1P25799 Gm44100-201ENSMUST00000204329 436 ntBASIC12.49□□□□□ -0.41
Nfkb1P25799 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nfkb1P25799 AC073947.1-201ENSMUST00000216991 649 ntBASIC12.49□□□□□ -0.41
Nfkb1P25799 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nfkb1P25799 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.49□□□□□ -0.41
Nfkb1P25799 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nfkb1P25799 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Nfkb1P25799 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nfkb1P25799 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nfkb1P25799 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nfkb1P25799 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nfkb1P25799 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nfkb1P25799 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
Nfkb1P25799 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nfkb1P25799 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nfkb1P25799 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nfkb1P25799 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nfkb1P25799 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.49□□□□□ -0.41
Nfkb1P25799 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nfkb1P25799 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nfkb1P25799 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nfkb1P25799 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nfkb1P25799 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nfkb1P25799 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nfkb1P25799 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Nfkb1P25799 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nfkb1P25799 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nfkb1P25799 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms