Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pde6bP23440 Mir1943-201ENSMUST00000158276 73 ntBASIC13.32□□□□□ -0.28
Pde6bP23440 Gm23699-201ENSMUST00000158835 135 ntBASIC13.32□□□□□ -0.28
Pde6bP23440 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.32□□□□□ -0.28
Pde6bP23440 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pde6bP23440 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.32□□□□□ -0.28
Pde6bP23440 Gm45118-201ENSMUST00000208928 825 ntBASIC13.32□□□□□ -0.28
Pde6bP23440 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pde6bP23440 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.32□□□□□ -0.28
Pde6bP23440 Gm29787-201ENSMUST00000222129 849 ntBASIC13.32□□□□□ -0.28
Pde6bP23440 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pde6bP23440 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pde6bP23440 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Pde6bP23440 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pde6bP23440 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pde6bP23440 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pde6bP23440 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pde6bP23440 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pde6bP23440 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.32□□□□□ -0.28
Pde6bP23440 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pde6bP23440 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Pde6bP23440 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pde6bP23440 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pde6bP23440 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pde6bP23440 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pde6bP23440 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pde6bP23440 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pde6bP23440 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pde6bP23440 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pde6bP23440 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pde6bP23440 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pde6bP23440 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.31□□□□□ -0.28
Pde6bP23440 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pde6bP23440 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pde6bP23440 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.31□□□□□ -0.28
Pde6bP23440 Gm24934-201ENSMUST00000103764 111 ntBASIC13.31□□□□□ -0.28
Pde6bP23440 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.31□□□□□ -0.28
Pde6bP23440 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.31□□□□□ -0.28
Pde6bP23440 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pde6bP23440 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pde6bP23440 Gm9550-201ENSMUST00000161130 862 ntBASIC13.31□□□□□ -0.28
Pde6bP23440 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pde6bP23440 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.31□□□□□ -0.28
Pde6bP23440 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.31□□□□□ -0.28
Pde6bP23440 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pde6bP23440 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pde6bP23440 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Pde6bP23440 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pde6bP23440 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pde6bP23440 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pde6bP23440 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pde6bP23440 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pde6bP23440 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pde6bP23440 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pde6bP23440 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pde6bP23440 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.31□□□□□ -0.28
Pde6bP23440 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pde6bP23440 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pde6bP23440 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pde6bP23440 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pde6bP23440 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pde6bP23440 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Pde6bP23440 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pde6bP23440 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pde6bP23440 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Pde6bP23440 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pde6bP23440 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pde6bP23440 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pde6bP23440 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pde6bP23440 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pde6bP23440 Gm22133-201ENSMUST00000102082 109 ntBASIC13.3□□□□□ -0.28
Pde6bP23440 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pde6bP23440 Gm11450-201ENSMUST00000121144 333 ntBASIC13.3□□□□□ -0.28
Pde6bP23440 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.3□□□□□ -0.28
Pde6bP23440 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Pde6bP23440 Gm3508-201ENSMUST00000186012 792 ntBASIC13.3□□□□□ -0.28
Pde6bP23440 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.3□□□□□ -0.28
Pde6bP23440 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.3□□□□□ -0.28
Pde6bP23440 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.3□□□□□ -0.28
Pde6bP23440 Gm19994-201ENSMUST00000217086 586 ntBASIC13.3□□□□□ -0.28
Pde6bP23440 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.3□□□□□ -0.28
Pde6bP23440 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pde6bP23440 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pde6bP23440 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pde6bP23440 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pde6bP23440 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Pde6bP23440 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pde6bP23440 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pde6bP23440 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pde6bP23440 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pde6bP23440 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pde6bP23440 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pde6bP23440 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pde6bP23440 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pde6bP23440 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pde6bP23440 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pde6bP23440 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pde6bP23440 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pde6bP23440 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pde6bP23440 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms