Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Hoxb9P20615 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.62□□□□□ -0.55
Hoxb9P20615 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.62□□□□□ -0.55
Hoxb9P20615 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Hoxb9P20615 Gm27046-201ENSMUST00000182160 463 ntBASIC11.62□□□□□ -0.55
Hoxb9P20615 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.62□□□□□ -0.55
Hoxb9P20615 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.62□□□□□ -0.55
Hoxb9P20615 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.62□□□□□ -0.55
Hoxb9P20615 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.62□□□□□ -0.55
Hoxb9P20615 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.62□□□□□ -0.55
Hoxb9P20615 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.62□□□□□ -0.55
Hoxb9P20615 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.62□□□□□ -0.55
Hoxb9P20615 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.62□□□□□ -0.55
Hoxb9P20615 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.62□□□□□ -0.55
Hoxb9P20615 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.62□□□□□ -0.55
Hoxb9P20615 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxb9P20615 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb9P20615 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb9P20615 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb9P20615 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Hoxb9P20615 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb9P20615 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb9P20615 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.61□□□□□ -0.55
Hoxb9P20615 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Hoxb9P20615 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb9P20615 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb9P20615 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb9P20615 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Hoxb9P20615 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.61□□□□□ -0.55
Hoxb9P20615 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb9P20615 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Hoxb9P20615 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Hoxb9P20615 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb9P20615 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb9P20615 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.61□□□□□ -0.55
Hoxb9P20615 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb9P20615 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb9P20615 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb9P20615 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb9P20615 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.61□□□□□ -0.55
Hoxb9P20615 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb9P20615 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb9P20615 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Hoxb9P20615 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Hoxb9P20615 AA914427-201ENSMUST00000193194 1166 ntBASIC11.61□□□□□ -0.55
Hoxb9P20615 Gm18893-201ENSMUST00000198416 943 ntBASIC11.61□□□□□ -0.55
Hoxb9P20615 Gm43179-201ENSMUST00000198797 275 ntBASIC11.61□□□□□ -0.55
Hoxb9P20615 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Hoxb9P20615 Gm45598-202ENSMUST00000210719 986 ntBASIC11.61□□□□□ -0.55
Hoxb9P20615 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.61□□□□□ -0.55
Hoxb9P20615 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.61□□□□□ -0.55
Hoxb9P20615 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.61□□□□□ -0.55
Hoxb9P20615 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb9P20615 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb9P20615 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb9P20615 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Hoxb9P20615 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb9P20615 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.61□□□□□ -0.55
Hoxb9P20615 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb9P20615 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb9P20615 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb9P20615 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb9P20615 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.61□□□□□ -0.55
Hoxb9P20615 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.61□□□□□ -0.55
Hoxb9P20615 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb9P20615 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Hoxb9P20615 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Hoxb9P20615 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb9P20615 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb9P20615 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms