Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
VimP20152 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.29□□□□□ -0.44
VimP20152 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VimP20152 Gm15371-201ENSMUST00000117057 784 ntBASIC12.29□□□□□ -0.44
VimP20152 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.29□□□□□ -0.44
VimP20152 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.29□□□□□ -0.44
VimP20152 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.29□□□□□ -0.44
VimP20152 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VimP20152 Gm27430-201ENSMUST00000184585 107 ntBASIC12.29□□□□□ -0.44
VimP20152 Gm44333-201ENSMUST00000197168 107 ntBASIC12.29□□□□□ -0.44
VimP20152 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
VimP20152 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VimP20152 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VimP20152 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.29□□□□□ -0.44
VimP20152 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
VimP20152 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
VimP20152 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VimP20152 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
VimP20152 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VimP20152 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VimP20152 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
VimP20152 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
VimP20152 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VimP20152 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VimP20152 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VimP20152 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VimP20152 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VimP20152 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VimP20152 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VimP20152 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VimP20152 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
VimP20152 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VimP20152 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VimP20152 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VimP20152 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.28□□□□□ -0.44
VimP20152 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VimP20152 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VimP20152 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VimP20152 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VimP20152 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.28□□□□□ -0.44
VimP20152 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VimP20152 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VimP20152 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.28□□□□□ -0.44
VimP20152 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VimP20152 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VimP20152 Gm27741-201ENSMUST00000185060 237 ntBASIC12.28□□□□□ -0.44
VimP20152 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.28□□□□□ -0.44
VimP20152 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VimP20152 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.28□□□□□ -0.44
VimP20152 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.28□□□□□ -0.44
VimP20152 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VimP20152 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
VimP20152 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VimP20152 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VimP20152 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.28□□□□□ -0.44
VimP20152 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
VimP20152 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VimP20152 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
VimP20152 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.28□□□□□ -0.44
VimP20152 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VimP20152 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VimP20152 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VimP20152 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VimP20152 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VimP20152 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VimP20152 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VimP20152 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VimP20152 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VimP20152 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
VimP20152 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VimP20152 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.27□□□□□ -0.44
VimP20152 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
VimP20152 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
VimP20152 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.27□□□□□ -0.44
VimP20152 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
VimP20152 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
VimP20152 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.27□□□□□ -0.45
VimP20152 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VimP20152 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.27□□□□□ -0.45
VimP20152 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.27□□□□□ -0.45
VimP20152 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.27□□□□□ -0.45
VimP20152 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
VimP20152 Gm21854-201ENSMUST00000179901 471 ntBASIC12.27□□□□□ -0.45
VimP20152 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VimP20152 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.27□□□□□ -0.45
VimP20152 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.27□□□□□ -0.45
VimP20152 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.27□□□□□ -0.45
VimP20152 Gm9063-201ENSMUST00000223299 582 ntBASIC12.27□□□□□ -0.45
VimP20152 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VimP20152 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VimP20152 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
VimP20152 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.27□□□□□ -0.45
VimP20152 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
VimP20152 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
VimP20152 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
VimP20152 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VimP20152 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VimP20152 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.27□□□□□ -0.45
VimP20152 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.27□□□□□ -0.45
VimP20152 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms