Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm7498-201ENSMUST00000203282 1084 ntBASIC9.86□□□□□ -0.83
Cdx1P18111 Gm9299-201ENSMUST00000206392 1140 ntBASIC9.86□□□□□ -0.83
Cdx1P18111 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx1P18111 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC9.86□□□□□ -0.83
Cdx1P18111 Gm8227-201ENSMUST00000223306 571 ntBASIC9.86□□□□□ -0.83
Cdx1P18111 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx1P18111 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx1P18111 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx1P18111 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC9.86□□□□□ -0.83
Cdx1P18111 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Cdx1P18111 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx1P18111 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx1P18111 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx1P18111 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx1P18111 Gm13135-201ENSMUST00000117628 3121 ntBASIC9.86□□□□□ -0.83
Cdx1P18111 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Cdx1P18111 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Cdx1P18111 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx1P18111 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx1P18111 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx1P18111 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx1P18111 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC9.85□□□□□ -0.83
Cdx1P18111 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Cdx1P18111 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Cdx1P18111 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx1P18111 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx1P18111 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx1P18111 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx1P18111 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx1P18111 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx1P18111 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC9.85□□□□□ -0.83
Cdx1P18111 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx1P18111 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx1P18111 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx1P18111 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Cdx1P18111 Gm12384-201ENSMUST00000119228 919 ntBASIC9.85□□□□□ -0.83
Cdx1P18111 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC9.85□□□□□ -0.83
Cdx1P18111 Gm8062-201ENSMUST00000139696 444 ntBASIC9.85□□□□□ -0.83
Cdx1P18111 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC9.85□□□□□ -0.83
Cdx1P18111 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx1P18111 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx1P18111 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx1P18111 Gm42693-201ENSMUST00000196779 631 ntBASIC9.85□□□□□ -0.83
Cdx1P18111 Gm18473-201ENSMUST00000220543 868 ntBASIC9.85□□□□□ -0.83
Cdx1P18111 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx1P18111 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx1P18111 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx1P18111 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx1P18111 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Cdx1P18111 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx1P18111 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx1P18111 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx1P18111 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Cdx1P18111 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx1P18111 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC9.85□□□□□ -0.83
Cdx1P18111 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx1P18111 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx1P18111 Gm45089-201ENSMUST00000208082 2040 ntBASIC9.85□□□□□ -0.83
Cdx1P18111 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx1P18111 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Cdx1P18111 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx1P18111 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx1P18111 Gm13050-201ENSMUST00000122149 1345 ntBASIC9.84□□□□□ -0.83
Cdx1P18111 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Cdx1P18111 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx1P18111 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx1P18111 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx1P18111 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx1P18111 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx1P18111 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Cdx1P18111 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx1P18111 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC9.84□□□□□ -0.83
Cdx1P18111 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx1P18111 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx1P18111 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx1P18111 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx1P18111 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Cdx1P18111 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC9.84□□□□□ -0.83
Cdx1P18111 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx1P18111 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx1P18111 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx1P18111 Gm42550-201ENSMUST00000201553 960 ntBASIC9.84□□□□□ -0.83
Cdx1P18111 Gm4971-201ENSMUST00000205991 1108 ntBASIC9.84□□□□□ -0.83
Cdx1P18111 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC9.84□□□□□ -0.83
Cdx1P18111 AC138604.1-201ENSMUST00000226969 739 ntBASIC9.84□□□□□ -0.83
Cdx1P18111 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx1P18111 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC9.84□□□□□ -0.83
Cdx1P18111 Mir497b-201ENSMUST00000093601 125 ntBASIC9.84□□□□□ -0.83
Cdx1P18111 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Cdx1P18111 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx1P18111 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx1P18111 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx1P18111 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx1P18111 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Cdx1P18111 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx1P18111 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC9.84□□□□□ -0.83
Cdx1P18111 Gm37648-201ENSMUST00000192072 2563 ntBASIC9.84□□□□□ -0.83
Cdx1P18111 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx1P18111 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx1P18111 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms