Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
P06344 Gm24990-201ENSMUST00000157406 323 ntBASIC10.85□□□□□ -0.67
P06344 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.85□□□□□ -0.67
P06344 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06344 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
P06344 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.85□□□□□ -0.67
P06344 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
P06344 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC10.85□□□□□ -0.67
P06344 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
P06344 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P06344 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.85□□□□□ -0.67
P06344 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.85□□□□□ -0.67
P06344 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06344 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06344 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06344 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06344 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06344 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.85□□□□□ -0.67
P06344 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P06344 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06344 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06344 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06344 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06344 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
P06344 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06344 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
P06344 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06344 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
P06344 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
P06344 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
P06344 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06344 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06344 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.84□□□□□ -0.67
P06344 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06344 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06344 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06344 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.84□□□□□ -0.67
P06344 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06344 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
P06344 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06344 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.84□□□□□ -0.67
P06344 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
P06344 Gm14277-201ENSMUST00000121195 360 ntBASIC10.84□□□□□ -0.67
P06344 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06344 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P06344 Gm27341-201ENSMUST00000183570 106 ntBASIC10.84□□□□□ -0.67
P06344 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
P06344 Gm42599-201ENSMUST00000201308 469 ntBASIC10.84□□□□□ -0.67
P06344 Gm17812-201ENSMUST00000204935 318 ntBASIC10.84□□□□□ -0.67
P06344 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.84□□□□□ -0.67
P06344 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.84□□□□□ -0.67
P06344 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06344 Gm8385-201ENSMUST00000058999 643 ntBASIC10.84□□□□□ -0.67
P06344 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06344 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P06344 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06344 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P06344 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P06344 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.84□□□□□ -0.67
P06344 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06344 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06344 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06344 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06344 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06344 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06344 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06344 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06344 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06344 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06344 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P06344 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06344 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
P06344 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
P06344 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
P06344 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
P06344 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
P06344 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P06344 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P06344 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P06344 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
P06344 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
P06344 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
P06344 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.83□□□□□ -0.68
P06344 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P06344 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.83□□□□□ -0.68
P06344 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P06344 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
P06344 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P06344 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
P06344 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
P06344 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
P06344 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
P06344 Gm14028-201ENSMUST00000117434 479 ntBASIC10.83□□□□□ -0.68
P06344 Gm37466-201ENSMUST00000195692 652 ntBASIC10.83□□□□□ -0.68
P06344 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC10.83□□□□□ -0.68
P06344 Gm45433-201ENSMUST00000209386 247 ntBASIC10.83□□□□□ -0.68
P06344 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P06344 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
P06344 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P06344 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms