Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.22□□□□□ -0.77
Hoxa3P02831 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 Gm24231-201ENSMUST00000104315 133 ntBASIC10.22□□□□□ -0.77
Hoxa3P02831 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.22□□□□□ -0.77
Hoxa3P02831 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Hoxa3P02831 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.22□□□□□ -0.77
Hoxa3P02831 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 Gm7003-201ENSMUST00000195089 312 ntBASIC10.22□□□□□ -0.77
Hoxa3P02831 Gm44651-201ENSMUST00000207343 372 ntBASIC10.22□□□□□ -0.77
Hoxa3P02831 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.22□□□□□ -0.77
Hoxa3P02831 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.22□□□□□ -0.77
Hoxa3P02831 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.22□□□□□ -0.77
Hoxa3P02831 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Hoxa3P02831 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.22□□□□□ -0.77
Hoxa3P02831 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.22□□□□□ -0.77
Hoxa3P02831 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Hoxa3P02831 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.22□□□□□ -0.77
Hoxa3P02831 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hoxa3P02831 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC10.22□□□□□ -0.77
Hoxa3P02831 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Hoxa3P02831 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.22□□□□□ -0.77
Hoxa3P02831 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Hoxa3P02831 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hoxa3P02831 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hoxa3P02831 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.21□□□□□ -0.77
Hoxa3P02831 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hoxa3P02831 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hoxa3P02831 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.21□□□□□ -0.77
Hoxa3P02831 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Hoxa3P02831 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Hoxa3P02831 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.21□□□□□ -0.77
Hoxa3P02831 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Hoxa3P02831 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hoxa3P02831 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
Hoxa3P02831 Gm14277-201ENSMUST00000121195 360 ntBASIC10.21□□□□□ -0.77
Hoxa3P02831 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hoxa3P02831 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.21□□□□□ -0.77
Hoxa3P02831 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Hoxa3P02831 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Hoxa3P02831 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hoxa3P02831 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Hoxa3P02831 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Hoxa3P02831 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.21□□□□□ -0.77
Hoxa3P02831 Rprl1-202ENSMUST00000198476 238 ntBASIC10.21□□□□□ -0.77
Hoxa3P02831 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.21□□□□□ -0.77
Hoxa3P02831 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.21□□□□□ -0.77
Hoxa3P02831 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Hoxa3P02831 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.21□□□□□ -0.77
Hoxa3P02831 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC10.21□□□□□ -0.77
Hoxa3P02831 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hoxa3P02831 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.21□□□□□ -0.77
Hoxa3P02831 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hoxa3P02831 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hoxa3P02831 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Hoxa3P02831 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.21□□□□□ -0.78
Hoxa3P02831 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hoxa3P02831 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hoxa3P02831 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Hoxa3P02831 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Hoxa3P02831 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hoxa3P02831 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.21□□□□□ -0.78
Hoxa3P02831 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.21□□□□□ -0.78
Hoxa3P02831 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hoxa3P02831 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Hoxa3P02831 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hoxa3P02831 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hoxa3P02831 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Hoxa3P02831 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hoxa3P02831 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Hoxa3P02831 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Hoxa3P02831 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.21□□□□□ -0.78
Hoxa3P02831 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hoxa3P02831 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 125.5 ms