Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.96□□□□□ -0.49
ClppO88696 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
ClppO88696 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.96□□□□□ -0.5
ClppO88696 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
ClppO88696 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
ClppO88696 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.96□□□□□ -0.5
ClppO88696 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
ClppO88696 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
ClppO88696 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
ClppO88696 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
ClppO88696 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
ClppO88696 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
ClppO88696 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
ClppO88696 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ClppO88696 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ClppO88696 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ClppO88696 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ClppO88696 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
ClppO88696 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
ClppO88696 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClppO88696 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.95□□□□□ -0.5
ClppO88696 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClppO88696 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.95□□□□□ -0.5
ClppO88696 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ClppO88696 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClppO88696 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClppO88696 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.95□□□□□ -0.5
ClppO88696 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.95□□□□□ -0.5
ClppO88696 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClppO88696 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClppO88696 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClppO88696 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClppO88696 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClppO88696 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
ClppO88696 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClppO88696 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ClppO88696 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.95□□□□□ -0.5
ClppO88696 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClppO88696 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.95□□□□□ -0.5
ClppO88696 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.95□□□□□ -0.5
ClppO88696 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ClppO88696 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.95□□□□□ -0.5
ClppO88696 Mir7070-201ENSMUST00000183657 86 ntBASIC11.95□□□□□ -0.5
ClppO88696 Gm18753-201ENSMUST00000201000 566 ntBASIC11.95□□□□□ -0.5
ClppO88696 Gm19208-201ENSMUST00000213861 912 ntBASIC11.95□□□□□ -0.5
ClppO88696 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.95□□□□□ -0.5
ClppO88696 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.95□□□□□ -0.5
ClppO88696 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClppO88696 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClppO88696 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.95□□□□□ -0.5
ClppO88696 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.95□□□□□ -0.5
ClppO88696 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClppO88696 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
ClppO88696 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ClppO88696 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.95□□□□□ -0.5
ClppO88696 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.95□□□□□ -0.5
ClppO88696 Gm37333-201ENSMUST00000192904 2251 ntBASIC11.95□□□□□ -0.5
ClppO88696 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.95□□□□□ -0.5
ClppO88696 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClppO88696 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.95□□□□□ -0.5
ClppO88696 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ClppO88696 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
ClppO88696 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ClppO88696 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.94□□□□□ -0.5
ClppO88696 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClppO88696 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
ClppO88696 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
ClppO88696 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.94□□□□□ -0.5
ClppO88696 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ClppO88696 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClppO88696 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClppO88696 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
ClppO88696 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ClppO88696 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClppO88696 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
ClppO88696 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
ClppO88696 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.94□□□□□ -0.5
ClppO88696 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.94□□□□□ -0.5
ClppO88696 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.94□□□□□ -0.5
ClppO88696 Gm4909-201ENSMUST00000118749 794 ntBASIC11.94□□□□□ -0.5
ClppO88696 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.94□□□□□ -0.5
ClppO88696 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ClppO88696 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClppO88696 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
ClppO88696 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClppO88696 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
ClppO88696 Gm16505-201ENSMUST00000179981 232 ntBASIC11.94□□□□□ -0.5
ClppO88696 Gm2260-201ENSMUST00000184965 657 ntBASIC11.94□□□□□ -0.5
ClppO88696 Rps4l-202ENSMUST00000204242 789 ntBASIC11.94□□□□□ -0.5
ClppO88696 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.94□□□□□ -0.5
ClppO88696 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClppO88696 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.94□□□□□ -0.5
ClppO88696 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClppO88696 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClppO88696 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
ClppO88696 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
ClppO88696 Gm10312-201ENSMUST00000078515 489 ntBASIC11.94□□□□□ -0.5
ClppO88696 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
ClppO88696 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ClppO88696 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms