Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cops4O88544 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cops4O88544 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cops4O88544 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cops4O88544 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cops4O88544 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cops4O88544 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Cops4O88544 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cops4O88544 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Cops4O88544 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cops4O88544 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.2□□□□□ -0.62
Cops4O88544 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cops4O88544 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cops4O88544 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cops4O88544 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.2□□□□□ -0.62
Cops4O88544 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cops4O88544 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cops4O88544 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cops4O88544 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cops4O88544 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cops4O88544 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cops4O88544 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cops4O88544 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cops4O88544 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cops4O88544 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cops4O88544 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.2□□□□□ -0.62
Cops4O88544 Gm11803-201ENSMUST00000119966 444 ntBASIC11.2□□□□□ -0.62
Cops4O88544 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.2□□□□□ -0.62
Cops4O88544 Mir1894-201ENSMUST00000122802 81 ntBASIC11.2□□□□□ -0.62
Cops4O88544 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.2□□□□□ -0.62
Cops4O88544 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cops4O88544 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.2□□□□□ -0.62
Cops4O88544 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.2□□□□□ -0.62
Cops4O88544 Gm6244-201ENSMUST00000178732 841 ntBASIC11.2□□□□□ -0.62
Cops4O88544 Gm4034-201ENSMUST00000187674 480 ntBASIC11.2□□□□□ -0.62
Cops4O88544 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.2□□□□□ -0.62
Cops4O88544 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.2□□□□□ -0.62
Cops4O88544 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cops4O88544 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cops4O88544 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cops4O88544 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cops4O88544 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cops4O88544 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cops4O88544 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cops4O88544 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cops4O88544 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Cops4O88544 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cops4O88544 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cops4O88544 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.2□□□□□ -0.62
Cops4O88544 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cops4O88544 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.2□□□□□ -0.62
Cops4O88544 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cops4O88544 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Cops4O88544 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Cops4O88544 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.19□□□□□ -0.62
Cops4O88544 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cops4O88544 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cops4O88544 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cops4O88544 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cops4O88544 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cops4O88544 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cops4O88544 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cops4O88544 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cops4O88544 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Cops4O88544 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cops4O88544 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.19□□□□□ -0.62
Cops4O88544 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.19□□□□□ -0.62
Cops4O88544 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cops4O88544 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.19□□□□□ -0.62
Cops4O88544 Gm12203-201ENSMUST00000118235 598 ntBASIC11.19□□□□□ -0.62
Cops4O88544 Gm13369-201ENSMUST00000119442 987 ntBASIC11.19□□□□□ -0.62
Cops4O88544 Gm12209-201ENSMUST00000120089 596 ntBASIC11.19□□□□□ -0.62
Cops4O88544 Gm16479-201ENSMUST00000121706 932 ntBASIC11.19□□□□□ -0.62
Cops4O88544 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cops4O88544 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.19□□□□□ -0.62
Cops4O88544 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.19□□□□□ -0.62
Cops4O88544 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cops4O88544 Gm22121-201ENSMUST00000175148 54 ntBASIC11.19□□□□□ -0.62
Cops4O88544 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.19□□□□□ -0.62
Cops4O88544 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.19□□□□□ -0.62
Cops4O88544 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.19□□□□□ -0.62
Cops4O88544 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.19□□□□□ -0.62
Cops4O88544 Gm24136-201ENSMUST00000083374 165 ntBASIC11.19□□□□□ -0.62
Cops4O88544 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.19□□□□□ -0.62
Cops4O88544 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cops4O88544 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Cops4O88544 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cops4O88544 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cops4O88544 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cops4O88544 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cops4O88544 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cops4O88544 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cops4O88544 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cops4O88544 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cops4O88544 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cops4O88544 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cops4O88544 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms