Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ttc3O88196 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ttc3O88196 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ttc3O88196 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ttc3O88196 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ttc3O88196 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ttc3O88196 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ttc3O88196 Gm15566-201ENSMUST00000121130 590 ntBASIC12.65□□□□□ -0.38
Ttc3O88196 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ttc3O88196 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.65□□□□□ -0.38
Ttc3O88196 Gm18367-201ENSMUST00000176139 600 ntBASIC12.65□□□□□ -0.38
Ttc3O88196 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.65□□□□□ -0.38
Ttc3O88196 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.65□□□□□ -0.38
Ttc3O88196 Gm43520-201ENSMUST00000197996 164 ntBASIC12.65□□□□□ -0.38
Ttc3O88196 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.65□□□□□ -0.38
Ttc3O88196 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
Ttc3O88196 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.65□□□□□ -0.38
Ttc3O88196 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.65□□□□□ -0.38
Ttc3O88196 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ttc3O88196 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ttc3O88196 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Ttc3O88196 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ttc3O88196 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ttc3O88196 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
Ttc3O88196 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ttc3O88196 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ttc3O88196 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ttc3O88196 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ttc3O88196 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ttc3O88196 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ttc3O88196 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ttc3O88196 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ttc3O88196 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ttc3O88196 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ttc3O88196 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.65□□□□□ -0.38
Ttc3O88196 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.65□□□□□ -0.38
Ttc3O88196 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.65□□□□□ -0.38
Ttc3O88196 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.65□□□□□ -0.38
Ttc3O88196 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
Ttc3O88196 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ttc3O88196 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ttc3O88196 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ttc3O88196 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ttc3O88196 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ttc3O88196 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.65□□□□□ -0.39
Ttc3O88196 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ttc3O88196 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ttc3O88196 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ttc3O88196 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Ttc3O88196 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ttc3O88196 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.64□□□□□ -0.39
Ttc3O88196 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.64□□□□□ -0.39
Ttc3O88196 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ttc3O88196 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ttc3O88196 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ttc3O88196 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ttc3O88196 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Ttc3O88196 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ttc3O88196 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ttc3O88196 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ttc3O88196 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ttc3O88196 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Ttc3O88196 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ttc3O88196 Gm5714-201ENSMUST00000197343 566 ntBASIC12.64□□□□□ -0.39
Ttc3O88196 Gm43186-201ENSMUST00000198130 824 ntBASIC12.64□□□□□ -0.39
Ttc3O88196 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ttc3O88196 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.64□□□□□ -0.39
Ttc3O88196 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ttc3O88196 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ttc3O88196 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ttc3O88196 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ttc3O88196 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ttc3O88196 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ttc3O88196 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ttc3O88196 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ttc3O88196 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ttc3O88196 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ttc3O88196 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ttc3O88196 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ttc3O88196 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ttc3O88196 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Ttc3O88196 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ttc3O88196 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ttc3O88196 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ttc3O88196 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ttc3O88196 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ttc3O88196 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ttc3O88196 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ttc3O88196 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ttc3O88196 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ttc3O88196 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ttc3O88196 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ttc3O88196 Gm24891-201ENSMUST00000104391 136 ntBASIC12.63□□□□□ -0.39
Ttc3O88196 Gm11956-201ENSMUST00000119525 512 ntBASIC12.63□□□□□ -0.39
Ttc3O88196 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.63□□□□□ -0.39
Ttc3O88196 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ttc3O88196 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ttc3O88196 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ttc3O88196 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.63□□□□□ -0.39
Ttc3O88196 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms