Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trdmt1O55055 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trdmt1O55055 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trdmt1O55055 Gm22711-201ENSMUST00000116890 133 ntBASIC13.36□□□□□ -0.27
Trdmt1O55055 Gm12899-201ENSMUST00000120565 551 ntBASIC13.36□□□□□ -0.27
Trdmt1O55055 Gm16397-201ENSMUST00000122201 494 ntBASIC13.36□□□□□ -0.27
Trdmt1O55055 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.36□□□□□ -0.27
Trdmt1O55055 Gm6485-201ENSMUST00000160676 439 ntBASIC13.36□□□□□ -0.27
Trdmt1O55055 Gm23153-201ENSMUST00000175323 313 ntBASIC13.36□□□□□ -0.27
Trdmt1O55055 Gm10731-201ENSMUST00000181171 448 ntBASIC13.36□□□□□ -0.27
Trdmt1O55055 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trdmt1O55055 Gm4654-201ENSMUST00000183305 982 ntBASIC13.36□□□□□ -0.27
Trdmt1O55055 Mir6958-201ENSMUST00000184207 73 ntBASIC13.36□□□□□ -0.27
Trdmt1O55055 Gm37905-201ENSMUST00000195310 341 ntBASIC13.36□□□□□ -0.27
Trdmt1O55055 Gm9645-201ENSMUST00000197131 792 ntBASIC13.36□□□□□ -0.27
Trdmt1O55055 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trdmt1O55055 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trdmt1O55055 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.36□□□□□ -0.27
Trdmt1O55055 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trdmt1O55055 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Trdmt1O55055 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trdmt1O55055 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trdmt1O55055 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Trdmt1O55055 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trdmt1O55055 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trdmt1O55055 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trdmt1O55055 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trdmt1O55055 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trdmt1O55055 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trdmt1O55055 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trdmt1O55055 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trdmt1O55055 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.35□□□□□ -0.27
Trdmt1O55055 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trdmt1O55055 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trdmt1O55055 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trdmt1O55055 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.35□□□□□ -0.27
Trdmt1O55055 Gm12516-201ENSMUST00000120819 385 ntBASIC13.35□□□□□ -0.27
Trdmt1O55055 Gm11836-201ENSMUST00000121022 441 ntBASIC13.35□□□□□ -0.27
Trdmt1O55055 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.35□□□□□ -0.27
Trdmt1O55055 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trdmt1O55055 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC13.35□□□□□ -0.27
Trdmt1O55055 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC13.35□□□□□ -0.27
Trdmt1O55055 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trdmt1O55055 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
Trdmt1O55055 Gm21092-201ENSMUST00000178995 955 ntBASIC13.35□□□□□ -0.27
Trdmt1O55055 Gm38117-201ENSMUST00000194653 939 ntBASIC13.35□□□□□ -0.27
Trdmt1O55055 Gm43520-201ENSMUST00000197996 164 ntBASIC13.35□□□□□ -0.27
Trdmt1O55055 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trdmt1O55055 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trdmt1O55055 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trdmt1O55055 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trdmt1O55055 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trdmt1O55055 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trdmt1O55055 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Trdmt1O55055 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trdmt1O55055 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trdmt1O55055 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trdmt1O55055 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trdmt1O55055 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trdmt1O55055 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trdmt1O55055 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trdmt1O55055 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trdmt1O55055 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trdmt1O55055 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trdmt1O55055 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trdmt1O55055 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trdmt1O55055 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trdmt1O55055 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trdmt1O55055 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trdmt1O55055 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.34□□□□□ -0.27
Trdmt1O55055 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trdmt1O55055 Gm1848-201ENSMUST00000120711 789 ntBASIC13.34□□□□□ -0.27
Trdmt1O55055 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC13.34□□□□□ -0.27
Trdmt1O55055 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.34□□□□□ -0.27
Trdmt1O55055 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trdmt1O55055 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trdmt1O55055 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC13.34□□□□□ -0.27
Trdmt1O55055 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC13.34□□□□□ -0.27
Trdmt1O55055 Gm29155-201ENSMUST00000185910 269 ntBASIC13.34□□□□□ -0.27
Trdmt1O55055 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC13.34□□□□□ -0.27
Trdmt1O55055 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13.34□□□□□ -0.27
Trdmt1O55055 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC13.34□□□□□ -0.27
Trdmt1O55055 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC13.34□□□□□ -0.27
Trdmt1O55055 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.34□□□□□ -0.27
Trdmt1O55055 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trdmt1O55055 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trdmt1O55055 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trdmt1O55055 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trdmt1O55055 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.34□□□□□ -0.27
Trdmt1O55055 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trdmt1O55055 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trdmt1O55055 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trdmt1O55055 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trdmt1O55055 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trdmt1O55055 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trdmt1O55055 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Trdmt1O55055 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trdmt1O55055 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trdmt1O55055 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trdmt1O55055 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms