Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.43□□□□□ -0.1
Smarce1O54941 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarce1O54941 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarce1O54941 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarce1O54941 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.43□□□□□ -0.1
Smarce1O54941 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smarce1O54941 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC14.42□□□□□ -0.1
Smarce1O54941 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarce1O54941 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.42□□□□□ -0.1
Smarce1O54941 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarce1O54941 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14.42□□□□□ -0.1
Smarce1O54941 Gm43760-201ENSMUST00000202120 3015 ntBASIC14.42□□□□□ -0.1
Smarce1O54941 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smarce1O54941 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Smarce1O54941 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarce1O54941 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Smarce1O54941 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Smarce1O54941 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarce1O54941 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
Smarce1O54941 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.42□□□□□ -0.1
Smarce1O54941 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smarce1O54941 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.42□□□□□ -0.1
Smarce1O54941 Gm18711-201ENSMUST00000199341 750 ntBASIC14.42□□□□□ -0.1
Smarce1O54941 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarce1O54941 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.42□□□□□ -0.1
Smarce1O54941 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarce1O54941 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarce1O54941 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smarce1O54941 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smarce1O54941 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarce1O54941 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Smarce1O54941 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarce1O54941 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarce1O54941 AC154639.1-201ENSMUST00000224393 2849 ntBASIC14.42□□□□□ -0.1
Smarce1O54941 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarce1O54941 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smarce1O54941 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarce1O54941 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Smarce1O54941 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarce1O54941 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Smarce1O54941 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarce1O54941 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smarce1O54941 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Smarce1O54941 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarce1O54941 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.41□□□□□ -0.1
Smarce1O54941 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Smarce1O54941 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Smarce1O54941 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smarce1O54941 Gm25261-201ENSMUST00000157416 134 ntBASIC14.41□□□□□ -0.1
Smarce1O54941 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.41□□□□□ -0.1
Smarce1O54941 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.41□□□□□ -0.1
Smarce1O54941 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Smarce1O54941 Gm42937-201ENSMUST00000197360 752 ntBASIC14.41□□□□□ -0.1
Smarce1O54941 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.41□□□□□ -0.1
Smarce1O54941 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.41□□□□□ -0.1
Smarce1O54941 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smarce1O54941 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.41□□□□□ -0.1
Smarce1O54941 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smarce1O54941 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Smarce1O54941 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarce1O54941 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarce1O54941 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarce1O54941 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarce1O54941 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarce1O54941 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarce1O54941 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarce1O54941 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarce1O54941 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Smarce1O54941 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarce1O54941 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smarce1O54941 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarce1O54941 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarce1O54941 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smarce1O54941 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarce1O54941 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarce1O54941 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smarce1O54941 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarce1O54941 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smarce1O54941 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC14.4□□□□□ -0.1
Smarce1O54941 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarce1O54941 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarce1O54941 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.4□□□□□ -0.1
Smarce1O54941 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarce1O54941 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Smarce1O54941 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarce1O54941 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarce1O54941 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC14.4□□□□□ -0.1
Smarce1O54941 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smarce1O54941 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarce1O54941 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarce1O54941 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.4□□□□□ -0.1
Smarce1O54941 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Smarce1O54941 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC14.4□□□□□ -0.1
Smarce1O54941 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.4□□□□□ -0.1
Smarce1O54941 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.4□□□□□ -0.1
Smarce1O54941 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smarce1O54941 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smarce1O54941 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarce1O54941 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smarce1O54941 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms