Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Limk2O54785 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.34□□□□□ -0.43
Limk2O54785 Gm13296-201ENSMUST00000117854 997 ntBASIC12.34□□□□□ -0.43
Limk2O54785 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.34□□□□□ -0.43
Limk2O54785 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.34□□□□□ -0.43
Limk2O54785 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.34□□□□□ -0.43
Limk2O54785 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Limk2O54785 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.34□□□□□ -0.43
Limk2O54785 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.34□□□□□ -0.43
Limk2O54785 Gm9230-201ENSMUST00000188228 532 ntBASIC12.34□□□□□ -0.43
Limk2O54785 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.34□□□□□ -0.43
Limk2O54785 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.34□□□□□ -0.43
Limk2O54785 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.34□□□□□ -0.43
Limk2O54785 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Limk2O54785 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Limk2O54785 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Limk2O54785 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Limk2O54785 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Limk2O54785 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Limk2O54785 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Limk2O54785 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Limk2O54785 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Limk2O54785 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.43
Limk2O54785 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Limk2O54785 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.33□□□□□ -0.44
Limk2O54785 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Limk2O54785 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Limk2O54785 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Limk2O54785 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.33□□□□□ -0.44
Limk2O54785 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Limk2O54785 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Limk2O54785 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Limk2O54785 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Limk2O54785 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Limk2O54785 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Limk2O54785 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
Limk2O54785 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Limk2O54785 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Limk2O54785 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Limk2O54785 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.33□□□□□ -0.44
Limk2O54785 Gm23200-201ENSMUST00000104379 132 ntBASIC12.33□□□□□ -0.44
Limk2O54785 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Limk2O54785 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.33□□□□□ -0.44
Limk2O54785 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Limk2O54785 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.33□□□□□ -0.44
Limk2O54785 Gm6963-201ENSMUST00000147879 379 ntBASIC12.33□□□□□ -0.44
Limk2O54785 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.33□□□□□ -0.44
Limk2O54785 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Limk2O54785 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.33□□□□□ -0.44
Limk2O54785 Gm19187-201ENSMUST00000206781 892 ntBASIC12.33□□□□□ -0.44
Limk2O54785 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Limk2O54785 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.33□□□□□ -0.44
Limk2O54785 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Limk2O54785 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.33□□□□□ -0.44
Limk2O54785 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Limk2O54785 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.33□□□□□ -0.44
Limk2O54785 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Limk2O54785 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Limk2O54785 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Limk2O54785 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Limk2O54785 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Limk2O54785 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Limk2O54785 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Limk2O54785 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Limk2O54785 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.33□□□□□ -0.44
Limk2O54785 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Limk2O54785 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Limk2O54785 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Limk2O54785 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Limk2O54785 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Limk2O54785 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Limk2O54785 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Limk2O54785 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Limk2O54785 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.32□□□□□ -0.44
Limk2O54785 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Limk2O54785 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Limk2O54785 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Limk2O54785 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Limk2O54785 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Limk2O54785 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Limk2O54785 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Limk2O54785 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Limk2O54785 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Limk2O54785 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms