Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
AlyrefO08583 BC106175-202ENSMUST00000219344 1213 ntBASIC12.4□□□□□ -0.42
AlyrefO08583 Pinx1-201ENSMUST00000022528 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AlyrefO08583 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AlyrefO08583 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.4□□□□□ -0.42
AlyrefO08583 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AlyrefO08583 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
AlyrefO08583 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
AlyrefO08583 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AlyrefO08583 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AlyrefO08583 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
AlyrefO08583 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
AlyrefO08583 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
AlyrefO08583 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AlyrefO08583 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.4□□□□□ -0.42
AlyrefO08583 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AlyrefO08583 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.43
AlyrefO08583 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
AlyrefO08583 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
AlyrefO08583 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.4□□□□□ -0.43
AlyrefO08583 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
AlyrefO08583 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
AlyrefO08583 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
AlyrefO08583 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 Gm22594-201ENSMUST00000104251 130 ntBASIC12.39□□□□□ -0.43
AlyrefO08583 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.39□□□□□ -0.43
AlyrefO08583 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 Gm23085-201ENSMUST00000157849 293 ntBASIC12.39□□□□□ -0.43
AlyrefO08583 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
AlyrefO08583 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.39□□□□□ -0.43
AlyrefO08583 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
AlyrefO08583 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
AlyrefO08583 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.39□□□□□ -0.43
AlyrefO08583 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 Gm18706-201ENSMUST00000210053 1066 ntBASIC12.39□□□□□ -0.43
AlyrefO08583 Gm45594-201ENSMUST00000211717 241 ntBASIC12.39□□□□□ -0.43
AlyrefO08583 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.39□□□□□ -0.43
AlyrefO08583 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.39□□□□□ -0.43
AlyrefO08583 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.39□□□□□ -0.43
AlyrefO08583 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.39□□□□□ -0.43
AlyrefO08583 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
AlyrefO08583 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
AlyrefO08583 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 Matn2-203ENSMUST00000226766 3252 ntBASIC12.39□□□□□ -0.43
AlyrefO08583 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.39□□□□□ -0.43
AlyrefO08583 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.39□□□□□ -0.43
AlyrefO08583 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
AlyrefO08583 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AlyrefO08583 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
AlyrefO08583 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
AlyrefO08583 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AlyrefO08583 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
AlyrefO08583 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.38□□□□□ -0.43
AlyrefO08583 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
AlyrefO08583 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AlyrefO08583 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AlyrefO08583 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
AlyrefO08583 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.38□□□□□ -0.43
AlyrefO08583 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AlyrefO08583 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AlyrefO08583 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AlyrefO08583 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
AlyrefO08583 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AlyrefO08583 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
AlyrefO08583 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AlyrefO08583 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
AlyrefO08583 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AlyrefO08583 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
AlyrefO08583 Gm13736-201ENSMUST00000119272 253 ntBASIC12.38□□□□□ -0.43
AlyrefO08583 Gm16071-201ENSMUST00000119589 793 ntBASIC12.38□□□□□ -0.43
AlyrefO08583 Gm9166-201ENSMUST00000120293 561 ntBASIC12.38□□□□□ -0.43
AlyrefO08583 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
AlyrefO08583 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.38□□□□□ -0.43
AlyrefO08583 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms