Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Gm23119-201ENSMUST00000158610 140 ntBASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Gm4768-201ENSMUST00000206199 686 ntBASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.06□□□□□ -0.64
Shisa8J3QNX5 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shisa8J3QNX5 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Gm7029-201ENSMUST00000173226 450 ntBASIC11.05□□□□□ -0.64
Shisa8J3QNX5 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.05□□□□□ -0.64
Shisa8J3QNX5 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shisa8J3QNX5 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms