Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 AY036118-201ENSMUST00000200021 923 ntBASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Gm44958-201ENSMUST00000203734 736 ntBASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Pcdh17E9PXF0 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Gm24934-201ENSMUST00000103764 111 ntBASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Gm23119-201ENSMUST00000158610 140 ntBASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Gm27627-201ENSMUST00000183644 150 ntBASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Gm43378-201ENSMUST00000199336 582 ntBASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh17E9PXF0 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Gm12380-201ENSMUST00000119012 544 ntBASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Gm5616-201ENSMUST00000165252 384 ntBASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Gm8741-201ENSMUST00000174736 384 ntBASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Pcdh17E9PXF0 Gm42997-202ENSMUST00000200321 985 ntBASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms