Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Gm5254-201ENSMUST00000188353 977 ntBASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 AC134601.2-201ENSMUST00000221071 130 ntBASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 AC116797.2-202ENSMUST00000223587 1017 ntBASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 AC122356.2-201ENSMUST00000226962 820 ntBASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Dnmt3l-ps1-201ENSMUST00000118734 1253 ntBASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Gm13898-201ENSMUST00000141865 610 ntBASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Gm31274-201ENSMUST00000197356 229 ntBASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Gm44304-201ENSMUST00000200509 145 ntBASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Gm44540-201ENSMUST00000205640 354 ntBASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Gm45225-201ENSMUST00000206852 1139 ntBASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 AC134913.2-201ENSMUST00000225017 771 ntBASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Taar1-201ENSMUST00000051532 1114 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Gm23908-201ENSMUST00000104599 132 ntBASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 AC118639.1-202ENSMUST00000226957 653 ntBASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Gm12435-201ENSMUST00000118949 1016 ntBASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Gm5808-201ENSMUST00000178090 357 ntBASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Gm8601-201ENSMUST00000182096 909 ntBASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a3E9PWQ3 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Sav1-201ENSMUST00000021467 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Gm15549-201ENSMUST00000121595 622 ntBASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Gm8464-202ENSMUST00000146697 1142 ntBASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Gm4750-201ENSMUST00000151942 1142 ntBASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms