Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Gm14213-201ENSMUST00000119778 768 ntBASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Gm7741-201ENSMUST00000181445 989 ntBASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Gm42433-201ENSMUST00000196806 940 ntBASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Gm45856-201ENSMUST00000212752 416 ntBASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Gm18499-201ENSMUST00000220808 1021 ntBASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 AC134869.4-202ENSMUST00000224350 837 ntBASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Gm19680-201ENSMUST00000095050 1513 ntBASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Gm18798-201ENSMUST00000187264 1700 ntBASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Gm17709-201ENSMUST00000174536 1096 ntBASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Gm24809-201ENSMUST00000175318 271 ntBASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Gm5982-201ENSMUST00000196234 512 ntBASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hfm1D3Z4R1 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Hfm1D3Z4R1 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hfm1D3Z4R1 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hfm1D3Z4R1 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hfm1D3Z4R1 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hfm1D3Z4R1 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hfm1D3Z4R1 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hfm1D3Z4R1 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hfm1D3Z4R1 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hfm1D3Z4R1 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Hfm1D3Z4R1 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.78■□□□□ 0.28
Hfm1D3Z4R1 Gm38094-201ENSMUST00000195864 2978 ntBASIC16.78■□□□□ 0.28
Hfm1D3Z4R1 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hfm1D3Z4R1 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hfm1D3Z4R1 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hfm1D3Z4R1 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC16.78■□□□□ 0.28
Hfm1D3Z4R1 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hfm1D3Z4R1 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC16.78■□□□□ 0.28
Hfm1D3Z4R1 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC16.78■□□□□ 0.28
Hfm1D3Z4R1 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC16.78■□□□□ 0.28
Hfm1D3Z4R1 Gm26047-201ENSMUST00000157308 113 ntBASIC16.78■□□□□ 0.28
Hfm1D3Z4R1 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hfm1D3Z4R1 Gm5870-201ENSMUST00000196461 282 ntBASIC16.78■□□□□ 0.28
Hfm1D3Z4R1 Gm26047-202ENSMUST00000198840 115 ntBASIC16.78■□□□□ 0.28
Hfm1D3Z4R1 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC16.78■□□□□ 0.28
Hfm1D3Z4R1 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC16.78■□□□□ 0.28
Hfm1D3Z4R1 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC16.78■□□□□ 0.28
Hfm1D3Z4R1 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hfm1D3Z4R1 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hfm1D3Z4R1 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Hfm1D3Z4R1 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hfm1D3Z4R1 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Hfm1D3Z4R1 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Hfm1D3Z4R1 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hfm1D3Z4R1 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hfm1D3Z4R1 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Hfm1D3Z4R1 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hfm1D3Z4R1 Gm37644-201ENSMUST00000192190 2270 ntBASIC16.77■□□□□ 0.28
Hfm1D3Z4R1 Gm1840-201ENSMUST00000051687 1432 ntBASIC16.77■□□□□ 0.28
Hfm1D3Z4R1 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hfm1D3Z4R1 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hfm1D3Z4R1 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hfm1D3Z4R1 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hfm1D3Z4R1 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hfm1D3Z4R1 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hfm1D3Z4R1 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Hfm1D3Z4R1 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.27
Hfm1D3Z4R1 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Hfm1D3Z4R1 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hfm1D3Z4R1 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms