Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Shank1D3YZU1 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Shank1D3YZU1 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Gm22711-201ENSMUST00000116890 133 ntBASIC10.89□□□□□ -0.67
Shank1D3YZU1 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Gm11511-201ENSMUST00000118146 540 ntBASIC10.89□□□□□ -0.67
Shank1D3YZU1 Gm25545-201ENSMUST00000122673 323 ntBASIC10.89□□□□□ -0.67
Shank1D3YZU1 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Gm15744-201ENSMUST00000161734 213 ntBASIC10.89□□□□□ -0.67
Shank1D3YZU1 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Gm7278-201ENSMUST00000119836 1401 ntBASIC10.89□□□□□ -0.67
Shank1D3YZU1 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Gm7541-201ENSMUST00000118361 535 ntBASIC10.89□□□□□ -0.67
Shank1D3YZU1 Gm11956-201ENSMUST00000119525 512 ntBASIC10.89□□□□□ -0.67
Shank1D3YZU1 Gm16071-201ENSMUST00000119589 793 ntBASIC10.89□□□□□ -0.67
Shank1D3YZU1 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Gm17826-201ENSMUST00000189720 798 ntBASIC10.89□□□□□ -0.67
Shank1D3YZU1 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC10.89□□□□□ -0.67
Shank1D3YZU1 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Gm44158-201ENSMUST00000203881 505 ntBASIC10.89□□□□□ -0.67
Shank1D3YZU1 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shank1D3YZU1 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.88□□□□□ -0.67
Shank1D3YZU1 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.88□□□□□ -0.67
Shank1D3YZU1 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.88□□□□□ -0.67
Shank1D3YZU1 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC10.88□□□□□ -0.67
Shank1D3YZU1 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Gm18159-201ENSMUST00000174516 1070 ntBASIC10.88□□□□□ -0.67
Shank1D3YZU1 Gm25951-201ENSMUST00000175330 64 ntBASIC10.88□□□□□ -0.67
Shank1D3YZU1 Gm43186-201ENSMUST00000198130 824 ntBASIC10.88□□□□□ -0.67
Shank1D3YZU1 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.88□□□□□ -0.67
Shank1D3YZU1 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Gm9797-202ENSMUST00000218003 294 ntBASIC10.88□□□□□ -0.67
Shank1D3YZU1 Gm19009-201ENSMUST00000223072 823 ntBASIC10.88□□□□□ -0.67
Shank1D3YZU1 AC165260.2-203ENSMUST00000224237 336 ntBASIC10.88□□□□□ -0.67
Shank1D3YZU1 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Gm6430-201ENSMUST00000054664 1248 ntBASIC10.88□□□□□ -0.67
Shank1D3YZU1 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shank1D3YZU1 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms