Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.67□□□□□ -0.38
Scn1aA2APX8 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn1aA2APX8 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Gm12165-201ENSMUST00000117047 342 ntBASIC12.66□□□□□ -0.38
Scn1aA2APX8 Gm7851-201ENSMUST00000117574 323 ntBASIC12.66□□□□□ -0.38
Scn1aA2APX8 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Gm6114-201ENSMUST00000182472 968 ntBASIC12.66□□□□□ -0.38
Scn1aA2APX8 Mir6546-201ENSMUST00000184460 62 ntBASIC12.66□□□□□ -0.38
Scn1aA2APX8 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1aA2APX8 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Gm4482-201ENSMUST00000200876 742 ntBASIC12.66□□□□□ -0.38
Scn1aA2APX8 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1aA2APX8 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1aA2APX8 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1aA2APX8 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Gm13809-201ENSMUST00000117921 597 ntBASIC12.66□□□□□ -0.38
Scn1aA2APX8 Gm14441-201ENSMUST00000121960 540 ntBASIC12.66□□□□□ -0.38
Scn1aA2APX8 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Gm20426-201ENSMUST00000173657 440 ntBASIC12.66□□□□□ -0.38
Scn1aA2APX8 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Gm8959-201ENSMUST00000213150 571 ntBASIC12.66□□□□□ -0.38
Scn1aA2APX8 Nsd1-205ENSMUST00000224693 852 ntBASIC12.66□□□□□ -0.38
Scn1aA2APX8 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.66□□□□□ -0.38
Scn1aA2APX8 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.66□□□□□ -0.38
Scn1aA2APX8 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1aA2APX8 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.65□□□□□ -0.38
Scn1aA2APX8 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1aA2APX8 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1aA2APX8 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1aA2APX8 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Scn1aA2APX8 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.65□□□□□ -0.38
Scn1aA2APX8 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.65□□□□□ -0.38
Scn1aA2APX8 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1aA2APX8 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1aA2APX8 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.65□□□□□ -0.38
Scn1aA2APX8 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Scn1aA2APX8 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Scn1aA2APX8 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.65□□□□□ -0.38
Scn1aA2APX8 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1aA2APX8 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1aA2APX8 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1aA2APX8 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1aA2APX8 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1aA2APX8 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1aA2APX8 Gm10774-201ENSMUST00000188689 204 ntBASIC12.65□□□□□ -0.38
Scn1aA2APX8 Gm45575-201ENSMUST00000210283 548 ntBASIC12.65□□□□□ -0.38
Scn1aA2APX8 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.65□□□□□ -0.38
Scn1aA2APX8 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1aA2APX8 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.65□□□□□ -0.38
Scn1aA2APX8 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn1aA2APX8 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.65□□□□□ -0.38
Scn1aA2APX8 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1aA2APX8 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Gm16166-201ENSMUST00000118291 787 ntBASIC12.64□□□□□ -0.39
Scn1aA2APX8 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.64□□□□□ -0.39
Scn1aA2APX8 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.64□□□□□ -0.39
Scn1aA2APX8 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Gm3150-201ENSMUST00000166418 204 ntBASIC12.64□□□□□ -0.39
Scn1aA2APX8 Gm27390-201ENSMUST00000184516 176 ntBASIC12.64□□□□□ -0.39
Scn1aA2APX8 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms