Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ubr4A2AN08 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ubr4A2AN08 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ubr4A2AN08 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ubr4A2AN08 Tbxas1-206ENSMUST00000162521 1427 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Ubr4A2AN08 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ubr4A2AN08 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC6.21□□□□□ -1.41
Ubr4A2AN08 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
Ubr4A2AN08 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
Ubr4A2AN08 Gm15132-201ENSMUST00000118581 652 ntBASIC6.21□□□□□ -1.41
Ubr4A2AN08 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Ubr4A2AN08 Pea15b-202ENSMUST00000183185 555 ntBASIC6.21□□□□□ -1.41
Ubr4A2AN08 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
Ubr4A2AN08 AC121960.1-201ENSMUST00000227982 564 ntBASIC6.21□□□□□ -1.41
Ubr4A2AN08 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ubr4A2AN08 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ubr4A2AN08 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC6.21□□□□□ -1.41
Ubr4A2AN08 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ubr4A2AN08 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Ubr4A2AN08 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Ubr4A2AN08 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ubr4A2AN08 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ubr4A2AN08 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ubr4A2AN08 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Ubr4A2AN08 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ubr4A2AN08 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Ubr4A2AN08 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ubr4A2AN08 Gm12817-201ENSMUST00000119622 610 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 Gm15197-201ENSMUST00000120526 478 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 Gm14407-201ENSMUST00000121260 447 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC6.21□□□□□ -1.42
Ubr4A2AN08 Gm23647-201ENSMUST00000175042 109 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 Rn5s-201ENSMUST00000177555 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 n-R5s108-201ENSMUST00000177575 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 n-R5s121-201ENSMUST00000177589 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 n-R5s146-201ENSMUST00000177889 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 Gm22109-201ENSMUST00000177995 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 Gm22291-201ENSMUST00000178027 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 n-R5s141-201ENSMUST00000178066 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 Gm23284-201ENSMUST00000178069 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 n-R5s100-201ENSMUST00000178106 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 n-R5s111-201ENSMUST00000178203 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 n-R5s105-201ENSMUST00000178499 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 n-R5s149-201ENSMUST00000178520 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 n-R5s103-201ENSMUST00000178755 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 n-R5s123-201ENSMUST00000178804 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 n-R5s142-201ENSMUST00000178820 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 n-R5s144-201ENSMUST00000178859 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 n-R5s139-201ENSMUST00000178975 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 n-R5s134-201ENSMUST00000178983 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 n-R5s136-201ENSMUST00000179080 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 Gm25018-201ENSMUST00000179081 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 n-R5s104-201ENSMUST00000179107 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 n-R5s113-201ENSMUST00000179143 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 n-R5s133-201ENSMUST00000179275 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 n-R5s117-201ENSMUST00000179431 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 Gm25212-201ENSMUST00000179432 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 n-R5s138-201ENSMUST00000179476 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 n-R5s122-201ENSMUST00000179500 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 n-R5s143-201ENSMUST00000179542 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 n-R5s107-201ENSMUST00000179704 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 Gm26391-201ENSMUST00000179843 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 n-R5s110-201ENSMUST00000179995 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 n-R5s128-201ENSMUST00000180096 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 n-R5s124-201ENSMUST00000180334 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 Mir8104-201ENSMUST00000185165 101 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 Gm7445-201ENSMUST00000192115 340 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 Gm7504-201ENSMUST00000201449 424 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 Gm44958-201ENSMUST00000203734 736 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 AC132384.2-201ENSMUST00000218018 526 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 Gm24089-201ENSMUST00000093696 109 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ubr4A2AN08 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ubr4A2AN08 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ubr4A2AN08 Fbxl12-205ENSMUST00000140702 1555 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 Gm4925-202ENSMUST00000168843 1561 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ubr4A2AN08 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ubr4A2AN08 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC6.21□□□□□ -1.42
Ubr4A2AN08 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ubr4A2AN08 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Ubr4A2AN08 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ubr4A2AN08 Gm45124-201ENSMUST00000206723 2755 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Ubr4A2AN08 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Ubr4A2AN08 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ubr4A2AN08 Mir1900-201ENSMUST00000122714 78 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 Gm11962-201ENSMUST00000145746 255 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 Ube4bos2-201ENSMUST00000154000 317 ntTSL 3 BASIC6.21□□□□□ -1.42
Ubr4A2AN08 Gm25154-201ENSMUST00000157123 119 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 AC155293.1-201ENSMUST00000219793 1026 ntBASIC6.21□□□□□ -1.42
Ubr4A2AN08 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC6.21□□□□□ -1.42
Ubr4A2AN08 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ubr4A2AN08 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Ubr4A2AN08 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ubr4A2AN08 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms