Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Gm9431-201ENSMUST00000119765 1051 ntBASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Gm12960-201ENSMUST00000120017 1066 ntBASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Gm8494-201ENSMUST00000178171 1233 ntBASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Gm27847-201ENSMUST00000183711 107 ntBASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Gm27375-201ENSMUST00000183799 107 ntBASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Gm18584-201ENSMUST00000203098 964 ntBASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Dhrs4-202ENSMUST00000226168 828 ntBASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Gm10268-201ENSMUST00000085340 555 ntBASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 AC124397.2-201ENSMUST00000225575 2215 ntBASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav12d-1A0N8R0 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Gm18782-201ENSMUST00000209023 1399 ntBASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Gm44086-201ENSMUST00000203251 2349 ntBASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Gm42442-201ENSMUST00000197951 1133 ntBASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Gm7067-201ENSMUST00000207698 1249 ntBASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Gm5626-201ENSMUST00000222151 1058 ntBASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav12d-1A0N8R0 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms