Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
H2afb3S4R1G7 Gm18304-201ENSMUST00000189162 546 ntBASIC10.97□□□□□ -0.65
H2afb3S4R1G7 Gm8762-201ENSMUST00000193486 339 ntBASIC10.97□□□□□ -0.65
H2afb3S4R1G7 Gm44958-201ENSMUST00000203734 736 ntBASIC10.97□□□□□ -0.65
H2afb3S4R1G7 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.97□□□□□ -0.65
H2afb3S4R1G7 Gm4935-201ENSMUST00000221316 1198 ntBASIC10.97□□□□□ -0.65
H2afb3S4R1G7 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.97□□□□□ -0.65
H2afb3S4R1G7 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
H2afb3S4R1G7 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.97□□□□□ -0.65
H2afb3S4R1G7 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.97□□□□□ -0.65
H2afb3S4R1G7 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
H2afb3S4R1G7 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
H2afb3S4R1G7 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
H2afb3S4R1G7 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
H2afb3S4R1G7 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
H2afb3S4R1G7 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.97□□□□□ -0.65
H2afb3S4R1G7 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
H2afb3S4R1G7 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.97□□□□□ -0.65
H2afb3S4R1G7 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
H2afb3S4R1G7 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
H2afb3S4R1G7 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
H2afb3S4R1G7 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
H2afb3S4R1G7 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
H2afb3S4R1G7 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
H2afb3S4R1G7 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
H2afb3S4R1G7 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
H2afb3S4R1G7 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
H2afb3S4R1G7 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
H2afb3S4R1G7 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
H2afb3S4R1G7 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
H2afb3S4R1G7 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.96□□□□□ -0.65
H2afb3S4R1G7 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Gm12314-201ENSMUST00000118104 538 ntBASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Gm9083-201ENSMUST00000120423 819 ntBASIC10.96□□□□□ -0.65
H2afb3S4R1G7 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Gm27023-201ENSMUST00000182372 285 ntBASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Gm5781-201ENSMUST00000219792 443 ntBASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Gm10076-201ENSMUST00000073238 384 ntBASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
H2afb3S4R1G7 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
H2afb3S4R1G7 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
H2afb3S4R1G7 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
H2afb3S4R1G7 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
H2afb3S4R1G7 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
H2afb3S4R1G7 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.96□□□□□ -0.66
H2afb3S4R1G7 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
H2afb3S4R1G7 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
H2afb3S4R1G7 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
H2afb3S4R1G7 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
H2afb3S4R1G7 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
H2afb3S4R1G7 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
H2afb3S4R1G7 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.96□□□□□ -0.66
H2afb3S4R1G7 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.66
H2afb3S4R1G7 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb3S4R1G7 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb3S4R1G7 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb3S4R1G7 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb3S4R1G7 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb3S4R1G7 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb3S4R1G7 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.95□□□□□ -0.66
H2afb3S4R1G7 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
H2afb3S4R1G7 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.95□□□□□ -0.66
H2afb3S4R1G7 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb3S4R1G7 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
H2afb3S4R1G7 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.95□□□□□ -0.66
H2afb3S4R1G7 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms