Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Gm23251-201ENSMUST00000103773 110 ntBASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Gm13408-201ENSMUST00000119822 798 ntBASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Gm13935-201ENSMUST00000121859 798 ntBASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Gm19287-201ENSMUST00000203190 358 ntBASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Gm8285-201ENSMUST00000208293 759 ntBASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Gm12165-201ENSMUST00000117047 342 ntBASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Gm45770-201ENSMUST00000212105 616 ntBASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Lect2-202ENSMUST00000225183 823 ntBASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 Gm17391-201ENSMUST00000171036 126 ntBASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn8aQ9WTU3 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Scn8aQ9WTU3 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Scn8aQ9WTU3 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Scn8aQ9WTU3 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Scn8aQ9WTU3 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Scn8aQ9WTU3 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Scn8aQ9WTU3 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Scn8aQ9WTU3 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Scn8aQ9WTU3 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Gm11660-201ENSMUST00000120955 412 ntBASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.14□□□□□ -0.47
Scn8aQ9WTU3 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms