Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AmfrQ9R049 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AmfrQ9R049 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AmfrQ9R049 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AmfrQ9R049 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AmfrQ9R049 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AmfrQ9R049 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AmfrQ9R049 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
AmfrQ9R049 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AmfrQ9R049 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
AmfrQ9R049 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
AmfrQ9R049 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AmfrQ9R049 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AmfrQ9R049 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
AmfrQ9R049 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
AmfrQ9R049 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
AmfrQ9R049 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
AmfrQ9R049 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AmfrQ9R049 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.62□□□□□ -0.23
AmfrQ9R049 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AmfrQ9R049 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AmfrQ9R049 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AmfrQ9R049 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AmfrQ9R049 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AmfrQ9R049 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AmfrQ9R049 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AmfrQ9R049 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AmfrQ9R049 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AmfrQ9R049 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
AmfrQ9R049 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
AmfrQ9R049 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
AmfrQ9R049 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AmfrQ9R049 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.61□□□□□ -0.23
AmfrQ9R049 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AmfrQ9R049 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
AmfrQ9R049 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AmfrQ9R049 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.61□□□□□ -0.23
AmfrQ9R049 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.61□□□□□ -0.23
AmfrQ9R049 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AmfrQ9R049 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.61□□□□□ -0.23
AmfrQ9R049 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AmfrQ9R049 Gm25043-201ENSMUST00000158604 212 ntBASIC13.61□□□□□ -0.23
AmfrQ9R049 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
AmfrQ9R049 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
AmfrQ9R049 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
AmfrQ9R049 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.61□□□□□ -0.23
AmfrQ9R049 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AmfrQ9R049 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
AmfrQ9R049 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AmfrQ9R049 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AmfrQ9R049 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AmfrQ9R049 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AmfrQ9R049 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AmfrQ9R049 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
AmfrQ9R049 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
AmfrQ9R049 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
AmfrQ9R049 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AmfrQ9R049 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
AmfrQ9R049 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
AmfrQ9R049 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
AmfrQ9R049 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
AmfrQ9R049 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
AmfrQ9R049 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AmfrQ9R049 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
AmfrQ9R049 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
AmfrQ9R049 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.6□□□□□ -0.23
AmfrQ9R049 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
AmfrQ9R049 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.6□□□□□ -0.23
AmfrQ9R049 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AmfrQ9R049 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AmfrQ9R049 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
AmfrQ9R049 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AmfrQ9R049 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AmfrQ9R049 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AmfrQ9R049 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.6□□□□□ -0.23
AmfrQ9R049 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
AmfrQ9R049 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
AmfrQ9R049 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
AmfrQ9R049 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
AmfrQ9R049 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
AmfrQ9R049 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
AmfrQ9R049 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
AmfrQ9R049 Gm13315-201ENSMUST00000120376 991 ntBASIC13.6□□□□□ -0.23
AmfrQ9R049 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AmfrQ9R049 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
AmfrQ9R049 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AmfrQ9R049 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AmfrQ9R049 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
AmfrQ9R049 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AmfrQ9R049 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AmfrQ9R049 Gm24136-201ENSMUST00000083374 165 ntBASIC13.6□□□□□ -0.23
AmfrQ9R049 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AmfrQ9R049 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AmfrQ9R049 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
AmfrQ9R049 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AmfrQ9R049 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AmfrQ9R049 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
AmfrQ9R049 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
AmfrQ9R049 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AmfrQ9R049 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms