Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 AC154767.3-201ENSMUST00000225150 1342 ntBASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Bcl2-202ENSMUST00000189999 2841 ntBASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Gm11594-201ENSMUST00000122313 162 ntBASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Gm7390-201ENSMUST00000212452 1216 ntBASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Gm17795-201ENSMUST00000214505 757 ntBASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trem1Q9JKE2 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Adcy4-201ENSMUST00000002398 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Sap30bpos-201ENSMUST00000132264 2352 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Gm25144-201ENSMUST00000179561 110 ntBASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Gm25352-201ENSMUST00000179815 110 ntBASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Gm27618-201ENSMUST00000183671 60 ntBASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Gm6888-201ENSMUST00000221983 706 ntBASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Gm19040-201ENSMUST00000203280 4726 ntBASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trem1Q9JKE2 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms