Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Gm44369-201ENSMUST00000204543 2175 ntBASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Gm9719-201ENSMUST00000162765 543 ntBASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Mir5131-201ENSMUST00000175426 93 ntBASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 AC153872.1-201ENSMUST00000199539 128 ntBASIC9.7□□□□□ -0.86
Smco4Q9JIS3 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 AC160405.1-201ENSMUST00000218207 1545 ntBASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC9.7□□□□□ -0.86
Smco4Q9JIS3 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Gm12403-201ENSMUST00000121384 959 ntBASIC9.69□□□□□ -0.86
Smco4Q9JIS3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Gm17271-201ENSMUST00000165535 355 ntBASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Gm4335-201ENSMUST00000182581 1004 ntBASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Gm28033-201ENSMUST00000184224 96 ntBASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Gm43143-201ENSMUST00000196083 2023 ntBASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Gm44985-201ENSMUST00000206202 1016 ntBASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Dupd1-202ENSMUST00000224735 548 ntBASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Gm10371-202ENSMUST00000228010 1081 ntBASIC9.69□□□□□ -0.86
Smco4Q9JIS3 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco4Q9JIS3 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms