Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Ccl28Q9JIL2 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl28Q9JIL2 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl28Q9JIL2 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl28Q9JIL2 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl28Q9JIL2 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
Ccl28Q9JIL2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl28Q9JIL2 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl28Q9JIL2 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Ccl28Q9JIL2 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Ccl28Q9JIL2 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl28Q9JIL2 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl28Q9JIL2 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl28Q9JIL2 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Ccl28Q9JIL2 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Ccl28Q9JIL2 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Ccl28Q9JIL2 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.82□□□□□ -0.84
Ccl28Q9JIL2 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl28Q9JIL2 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Gm12314-201ENSMUST00000118104 538 ntBASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Gm5637-201ENSMUST00000153890 1119 ntBASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Gm23119-201ENSMUST00000158610 140 ntBASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Gm44958-201ENSMUST00000203734 736 ntBASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 AC153974.2-201ENSMUST00000218577 1025 ntBASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Gm10076-201ENSMUST00000073238 384 ntBASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 AC122860.2-201ENSMUST00000217967 2671 ntBASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 AC130671.2-201ENSMUST00000227224 1621 ntBASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Arhgef3-204ENSMUST00000225949 3198 ntBASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl28Q9JIL2 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ccl28Q9JIL2 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ccl28Q9JIL2 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ccl28Q9JIL2 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Ccl28Q9JIL2 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ccl28Q9JIL2 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ccl28Q9JIL2 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ccl28Q9JIL2 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ccl28Q9JIL2 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ccl28Q9JIL2 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ccl28Q9JIL2 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ccl28Q9JIL2 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC9.8□□□□□ -0.84
Ccl28Q9JIL2 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Ccl28Q9JIL2 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ccl28Q9JIL2 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC9.8□□□□□ -0.84
Ccl28Q9JIL2 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Ccl28Q9JIL2 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ccl28Q9JIL2 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ccl28Q9JIL2 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ccl28Q9JIL2 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Ccl28Q9JIL2 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ccl28Q9JIL2 Gm13736-201ENSMUST00000119272 253 ntBASIC9.8□□□□□ -0.84
Ccl28Q9JIL2 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC9.8□□□□□ -0.84
Ccl28Q9JIL2 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC9.8□□□□□ -0.84
Ccl28Q9JIL2 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC9.8□□□□□ -0.84
Ccl28Q9JIL2 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 124.6 ms