Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Gm22323-201ENSMUST00000103832 109 ntBASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Gm25668-201ENSMUST00000157700 129 ntBASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Gm30285-201ENSMUST00000214614 422 ntBASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Gm6082-201ENSMUST00000215204 454 ntBASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Gm22058-201ENSMUST00000083393 310 ntBASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.1□□□□□ -0.47
Tubb3Q9ERD7 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Gm2546-201ENSMUST00000182630 991 ntBASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Gm18056-201ENSMUST00000207670 568 ntBASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Gm18061-201ENSMUST00000208350 562 ntBASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Gm18063-201ENSMUST00000208529 568 ntBASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Gm18052-201ENSMUST00000208750 559 ntBASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb3Q9ERD7 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Tubb3Q9ERD7 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.08□□□□□ -0.47
Tubb3Q9ERD7 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Tubb3Q9ERD7 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Tubb3Q9ERD7 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb3Q9ERD7 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms