Protein–RNA interactions for Protein: Q9DBU3

Riok3, Serine/threonine-protein kinase RIO3, mousemouse

Known RBP Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Riok3Q9DBU3 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Riok3Q9DBU3 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Riok3Q9DBU3 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Riok3Q9DBU3 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Riok3Q9DBU3 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Riok3Q9DBU3 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
Riok3Q9DBU3 Trp63-206ENSMUST00000115307 1782 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Zfp60-208ENSMUST00000167955 2115 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Psph-202ENSMUST00000118268 785 ntTSL 5 BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Gm13501-201ENSMUST00000118477 979 ntBASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Gm13217-201ENSMUST00000120466 953 ntBASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Gm29600-201ENSMUST00000188687 377 ntBASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Gm37404-201ENSMUST00000195726 359 ntBASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Gm43238-201ENSMUST00000196463 359 ntBASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Gm43506-201ENSMUST00000200675 753 ntBASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Gm6593-201ENSMUST00000211165 1135 ntBASIC14.39□□□□□ -0.11
Riok3Q9DBU3 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Gm5080-201ENSMUST00000220341 743 ntBASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.39□□□□□ -0.11
Riok3Q9DBU3 AC122393.1-201ENSMUST00000226570 319 ntBASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Olfr555-201ENSMUST00000098220 948 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Riok3Q9DBU3 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Parp11-204ENSMUST00000112195 733 ntTSL 3 BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Kcnj13-201ENSMUST00000113212 1270 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Gm16471-201ENSMUST00000121940 618 ntBASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Gm24962-201ENSMUST00000157917 109 ntBASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Pon1-203ENSMUST00000176945 619 ntTSL 5 BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Gm24694-201ENSMUST00000180054 110 ntBASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Gm27663-201ENSMUST00000184839 110 ntBASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Riok3Q9DBU3 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms