Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp2aQ9DB34 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Gm5070-201ENSMUST00000177599 862 ntBASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Gm9996-201ENSMUST00000070359 913 ntBASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Chmp2aQ9DB34 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms