Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 AC153929.1-201ENSMUST00000219009 303 ntBASIC15.34■□□□□ 0.05
Chmp4bQ9D8B3 AC154252.2-201ENSMUST00000223593 767 ntBASIC15.34■□□□□ 0.05
Chmp4bQ9D8B3 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp4bQ9D8B3 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC15.34■□□□□ 0.05
Chmp4bQ9D8B3 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Chmp4bQ9D8B3 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp4bQ9D8B3 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Chmp4bQ9D8B3 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp4bQ9D8B3 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Chmp4bQ9D8B3 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp4bQ9D8B3 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC15.34■□□□□ 0.05
Chmp4bQ9D8B3 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp4bQ9D8B3 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp4bQ9D8B3 Gm4864-201ENSMUST00000219894 1461 ntBASIC15.33■□□□□ 0.05
Chmp4bQ9D8B3 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp4bQ9D8B3 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp4bQ9D8B3 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp4bQ9D8B3 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp4bQ9D8B3 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp4bQ9D8B3 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Chmp4bQ9D8B3 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Chmp4bQ9D8B3 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp4bQ9D8B3 Gm15547-201ENSMUST00000122152 333 ntBASIC15.33■□□□□ 0.04
Chmp4bQ9D8B3 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC15.33■□□□□ 0.04
Chmp4bQ9D8B3 Gm9368-201ENSMUST00000219348 831 ntBASIC15.33■□□□□ 0.04
Chmp4bQ9D8B3 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp4bQ9D8B3 AC163667.3-201ENSMUST00000225774 222 ntBASIC15.33■□□□□ 0.04
Chmp4bQ9D8B3 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp4bQ9D8B3 Gm10312-201ENSMUST00000078515 489 ntBASIC15.33■□□□□ 0.04
Chmp4bQ9D8B3 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp4bQ9D8B3 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp4bQ9D8B3 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp4bQ9D8B3 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp4bQ9D8B3 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp4bQ9D8B3 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp4bQ9D8B3 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Chmp4bQ9D8B3 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp4bQ9D8B3 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp4bQ9D8B3 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Chmp4bQ9D8B3 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp4bQ9D8B3 Gm18626-201ENSMUST00000221512 1409 ntBASIC15.33■□□□□ 0.04
Chmp4bQ9D8B3 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp4bQ9D8B3 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp4bQ9D8B3 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Chmp4bQ9D8B3 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp4bQ9D8B3 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp4bQ9D8B3 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp4bQ9D8B3 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Gm25214-201ENSMUST00000104573 129 ntBASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Gm14726-201ENSMUST00000120623 896 ntBASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Gm27501-201ENSMUST00000183599 107 ntBASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Gm38241-201ENSMUST00000192641 898 ntBASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Gm21769-201ENSMUST00000211922 111 ntBASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Gm30285-201ENSMUST00000214614 422 ntBASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 AC132384.14-201ENSMUST00000219346 1147 ntBASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 AC166344.1-202ENSMUST00000224139 234 ntBASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 AC113031.8-201ENSMUST00000227856 631 ntBASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4bQ9D8B3 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4bQ9D8B3 Matn2-203ENSMUST00000226766 3252 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms