Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tmem54Q9D7S1 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tmem54Q9D7S1 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.68□□□□□ -0.7
Tmem54Q9D7S1 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tmem54Q9D7S1 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Gm13296-201ENSMUST00000117854 997 ntBASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Gm14247-201ENSMUST00000120950 237 ntBASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tmem54Q9D7S1 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Mir877-201ENSMUST00000104738 85 ntBASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Gm26361-201ENSMUST00000158868 186 ntBASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Gm42599-201ENSMUST00000201308 469 ntBASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Gm45224-201ENSMUST00000208203 414 ntBASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tmem54Q9D7S1 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms