Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc7Q9D541 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc7Q9D541 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc7Q9D541 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.2□□□□□ -0.14
Ccdc7Q9D541 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc7Q9D541 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.2□□□□□ -0.14
Ccdc7Q9D541 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.2□□□□□ -0.14
Ccdc7Q9D541 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc7Q9D541 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc7Q9D541 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ccdc7Q9D541 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc7Q9D541 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc7Q9D541 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc7Q9D541 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc7Q9D541 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC14.2□□□□□ -0.14
Ccdc7Q9D541 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc7Q9D541 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Gm38241-201ENSMUST00000192641 898 ntBASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Morn2-202ENSMUST00000227729 656 ntBASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc7Q9D541 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Gm43984-201ENSMUST00000204572 2864 ntBASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc7Q9D541 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Gm5419-201ENSMUST00000119301 527 ntBASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Gm15824-201ENSMUST00000119516 955 ntBASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Gm4986-201ENSMUST00000119731 549 ntBASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Gm14441-201ENSMUST00000121960 540 ntBASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7Q9D541 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14.18□□□□□ -0.14
Ccdc7Q9D541 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Gm37424-201ENSMUST00000191727 561 ntBASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.18□□□□□ -0.14
Ccdc7Q9D541 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7Q9D541 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7Q9D541 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc7Q9D541 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc7Q9D541 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc7Q9D541 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc7Q9D541 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc7Q9D541 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc7Q9D541 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc7Q9D541 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc7Q9D541 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc7Q9D541 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
Ccdc7Q9D541 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms