Protein–RNA interactions for Protein: Q9D516

Ccdc130, Coiled-coil domain-containing protein 130, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc130Q9D516 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc130Q9D516 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc130Q9D516 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc130Q9D516 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.29□□□□□ -0.44
Ccdc130Q9D516 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc130Q9D516 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc130Q9D516 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc130Q9D516 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc130Q9D516 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc130Q9D516 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc130Q9D516 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc130Q9D516 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc130Q9D516 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc130Q9D516 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc130Q9D516 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc130Q9D516 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc130Q9D516 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc130Q9D516 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc130Q9D516 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc130Q9D516 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc130Q9D516 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc130Q9D516 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ccdc130Q9D516 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc130Q9D516 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.28□□□□□ -0.44
Ccdc130Q9D516 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc130Q9D516 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc130Q9D516 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Ccdc130Q9D516 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc130Q9D516 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc130Q9D516 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc130Q9D516 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc130Q9D516 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc130Q9D516 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc130Q9D516 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc130Q9D516 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc130Q9D516 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc130Q9D516 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc130Q9D516 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc130Q9D516 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc130Q9D516 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc130Q9D516 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc130Q9D516 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc130Q9D516 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc130Q9D516 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc130Q9D516 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc130Q9D516 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc130Q9D516 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc130Q9D516 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc130Q9D516 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.44
Ccdc130Q9D516 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.27□□□□□ -0.44
Ccdc130Q9D516 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc130Q9D516 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc130Q9D516 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc130Q9D516 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc130Q9D516 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc130Q9D516 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc130Q9D516 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Gm11591-201ENSMUST00000120063 702 ntBASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.27□□□□□ -0.45
Ccdc130Q9D516 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.27□□□□□ -0.45
Ccdc130Q9D516 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.27□□□□□ -0.45
Ccdc130Q9D516 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc130Q9D516 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc130Q9D516 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc130Q9D516 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc130Q9D516 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms